RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
SS18L1-202ENST00000370848 SCN5AQ14524 2016 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 CFBP00751 764 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 HOXA13P31271 388 aaPredicted RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 NBPF20Q3BBV1 942 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 MCF2L2Q86YR7 1114 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 NSUN6Q8TEA1 469 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 MSRAQ9UJ68 235 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 YBX2Q9Y2T7 364 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 HOXD8P13378 290 aaPredicted RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 ADD1P35611 737 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 HSD17B4P51659 736 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 ADGRE1Q14246 886 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 OTOP2Q7RTS6 562 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 COPS5Q92905 334 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 SCLYQ96I15 445 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 SEC63Q9UGP8 760 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 MYL3P08590 195 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 CYP2C9P11712 490 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 POU3F3P20264 500 aaPredicted RBP17.47■□□□□ 0.39
SS18L1-202ENST00000370848 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
SS18L1-202ENST00000370848 PRDM12Q9H4Q4 367 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 SLC4A7Q9Y6M7 1214 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 NID2Q14112 1375 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 GH1P01241 217 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 MMP3P08254 477 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 IQCF3P0C7M6 154 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 EIF2AK2P19525 551 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 RCAN1P53805 252 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 ANAPC15P60006 121 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 STXBP2Q15833 593 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 PHOSPHO2Q8TCD6 241 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 KAT2BQ92831 832 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 RMDN3Q96TC7 470 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 NCOA5Q9HCD5 579 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 PTPRSQ13332 1948 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 BDP1A6H8Y1 2624 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 EVCP57679 992 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 WWC2Q6AWC2 1192 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 ATXN2LQ8WWM7 1075 aaKnown RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 SLC9A7Q96T83 725 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 TET1Q8NFU7 2136 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-202ENST00000370848 HAS3O00219 553 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 BAIAP3O94812 1187 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 F2P00734 622 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 POLR2MP0CAP2 368 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
SS18L1-202ENST00000370848 STK3Q13188 491 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 BFSP2Q13515 415 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 FCHSD1Q86WN1 690 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 IL31RAQ8NI17 732 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 AFG1LQ8WV93 481 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 RGS20O76081 388 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 PARNO95453 639 aaKnown RBP17.43■□□□□ 0.38
SS18L1-202ENST00000370848 NR3C2P08235 984 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 ACTN1P12814 892 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 TRAF1Q13077 416 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 GPNMBQ14956 572 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 LY6KQ17RY6 165 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 ARHGEF16Q5VV41 709 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 PPTC7Q8NI37 304 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 PHKBQ93100 1093 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 ZFP91Q96JP5 570 aaPredicted RBP17.43■□□□□ 0.38
SS18L1-202ENST00000370848 FRMPD4Q14CM0 1322 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 NCOR1O75376 2440 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 MEIS2O14770 477 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms