RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
SS18L1-202ENST00000370848 SCN5AQ14524 2016 aa17.5■□□□□ 0.39
SS18L1-202ENST00000370848 CFBP00751 764 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 HOXA13P31271 388 aaPredicted RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 NBPF20Q3BBV1 942 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 MCF2L2Q86YR7 1114 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 NSUN6Q8TEA1 469 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 MSRAQ9UJ68 235 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 YBX2Q9Y2T7 364 aaKnown RBP17.49■□□□□ 0.39
SS18L1-202ENST00000370848 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
SS18L1-202ENST00000370848 HOXD8P13378 290 aaPredicted RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 ADD1P35611 737 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 HSD17B4P51659 736 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 ADGRE1Q14246 886 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 OTOP2Q7RTS6 562 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 COPS5Q92905 334 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 SCLYQ96I15 445 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
SS18L1-202ENST00000370848 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 SEC63Q9UGP8 760 aaKnown RBP17.48■□□□□ 0.39
SS18L1-202ENST00000370848 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 MYL3P08590 195 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 CYP2C9P11712 490 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 POU3F3P20264 500 aaPredicted RBP17.47■□□□□ 0.39
SS18L1-202ENST00000370848 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
SS18L1-202ENST00000370848 PRDM12Q9H4Q4 367 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 SLC4A7Q9Y6M7 1214 aa17.47■□□□□ 0.39
SS18L1-202ENST00000370848 NID2Q14112 1375 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 GH1P01241 217 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 MMP3P08254 477 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 IQCF3P0C7M6 154 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 EIF2AK2P19525 551 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 RCAN1P53805 252 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 ANAPC15P60006 121 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 STXBP2Q15833 593 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 PHOSPHO2Q8TCD6 241 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 KAT2BQ92831 832 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 RMDN3Q96TC7 470 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 NCOA5Q9HCD5 579 aaKnown RBP17.46■□□□□ 0.39
SS18L1-202ENST00000370848 PTPRSQ13332 1948 aa17.46■□□□□ 0.39
SS18L1-202ENST00000370848 BDP1A6H8Y1 2624 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 EVCP57679 992 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 WWC2Q6AWC2 1192 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 ATXN2LQ8WWM7 1075 aaKnown RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 SLC9A7Q96T83 725 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
SS18L1-202ENST00000370848 TET1Q8NFU7 2136 aa17.45■□□□□ 0.38
SS18L1-202ENST00000370848 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-202ENST00000370848 HAS3O00219 553 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 BAIAP3O94812 1187 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 F2P00734 622 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 POLR2MP0CAP2 368 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
SS18L1-202ENST00000370848 STK3Q13188 491 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 BFSP2Q13515 415 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 FCHSD1Q86WN1 690 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 IL31RAQ8NI17 732 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 AFG1LQ8WV93 481 aa17.44■□□□□ 0.38
SS18L1-202ENST00000370848 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 RGS20O76081 388 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 PARNO95453 639 aaKnown RBP17.43■□□□□ 0.38
SS18L1-202ENST00000370848 NR3C2P08235 984 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 ACTN1P12814 892 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 TRAF1Q13077 416 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 GPNMBQ14956 572 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 LY6KQ17RY6 165 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 ARHGEF16Q5VV41 709 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 PPTC7Q8NI37 304 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 PHKBQ93100 1093 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 ZFP91Q96JP5 570 aaPredicted RBP17.43■□□□□ 0.38
SS18L1-202ENST00000370848 FRMPD4Q14CM0 1322 aa17.43■□□□□ 0.38
SS18L1-202ENST00000370848 NCOR1O75376 2440 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 MEIS2O14770 477 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms