RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 SLC9A5Q14940 896 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 NUGGCQ68CJ6 796 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 NUDCD1Q96RS6 583 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 ATP8A2Q9NTI2 1148 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 KIF17Q9P2E2 1029 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
COL11A1-203ENST00000370096 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 SUPT3HO75486 399 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 AFPP02771 609 aaKnown RBP12□□□□□ -0.49
COL11A1-203ENST00000370096 HNRNPH2P55795 449 aaKnown RBP12□□□□□ -0.49
COL11A1-203ENST00000370096 C7orf31Q8N865 590 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 UPF3AQ9H1J1 476 aaKnown RBP12□□□□□ -0.49
COL11A1-203ENST00000370096 KIF14Q15058 1648 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 ZMYM6O95789 1325 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 BRD1O95696 1058 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 POLR2MP0CAP2 368 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 KCNA4P22459 653 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 HADHAP40939 763 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 SULF1Q8IWU6 871 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 ZWILCHQ9H900 591 aa12□□□□□ -0.49
COL11A1-203ENST00000370096 GYG2O15488 501 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ZFXP17010 805 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ACTN3Q08043 901 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 PLA2G4DQ86XP0 818 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ZFYVE19Q96K21 471 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 DDX28Q9NUL7 540 aaKnown RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 TCP10L2B9ZVM9 353 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ANO4Q32M45 955 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 RSRC2Q7L4I2 434 aaKnown RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 LPIN2Q92539 896 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ACTR5Q9H9F9 607 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 BTBD18B2RXH4 712 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 HSPD1P10809 573 aaKnown RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 UBE2TQ9NPD8 197 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 RASGRF2O14827 1237 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 CDO1Q16878 200 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ZBTB33Q86T24 672 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 GIPC2Q8TF65 315 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 EYA1Q99502 592 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 TUBB6Q9BUF5 446 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 PPARGC1AQ9UBK2 798 aaKnown RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 AKT3Q9Y243 479 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 USP17L12C9JPN9 530 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 USP17L21D6R901 530 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 KDM1AO60341 852 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 HSPA4LO95757 839 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 A1BGP04217 495 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 DDIT3P35638 169 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 CLCN6P51797 869 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 NEK2P51955 445 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 BBS9Q3SYG4 887 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 GNPTABQ3T906 1256 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 BEND6Q5SZJ8 279 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 SYT2Q8N9I0 419 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ANKRD36BP1Q96IX9 119 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 FAM8A1Q9UBU6 413 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 CCPG1Q9ULG6 757 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 PYGLP06737 847 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ODR4Q5SWX8 454 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 ACBD5Q5T8D3 534 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-203ENST00000370096 RNF207Q6ZRF8 634 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 RPS6KC1Q96S38 1066 aa11.99□□□□□ -0.49
COL11A1-203ENST00000370096 PGRMC1O00264 195 aaKnown RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 PMLP29590 882 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 SNX19Q92543 992 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 NHEJ1Q9H9Q4 299 aaPredicted RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 CPSF3Q9UKF6 684 aaKnown RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 NFU1Q9UMS0 254 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 EIF3CLB5ME19 914 aaKnown RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 OSTNP61366 133 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 EIF3CQ99613 913 aaKnown RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 NOP53Q9NZM5 478 aaKnown RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 PLAAQ9Y263 795 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 MEIS1O00470 390 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 C11orf57Q6ZUT1 292 aaPredicted RBP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 OTULINQ96BN8 352 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 NT5C1BQ96P26 610 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 COL4A3BPQ9Y5P4 624 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 ESRRBO95718 433 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 HNRNPCP07910 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 CMA1P23946 247 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 NR2F2P24468 414 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 PABPC4Q13310 644 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL11A1-203ENST00000370096 C1orf146Q5VVC0 180 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 FAM180AQ6UWF9 173 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 MAST3O60307 1309 aa11.98□□□□□ -0.49
COL11A1-203ENST00000370096 ANP32DO95626 131 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms