RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 IGSF22Q8N9C0 903 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 POLD4Q9HCU8 107 aa11.12□□□□□ -0.63
PRPF38B-203ENST00000370025 SLC37A4O43826 429 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 FOSP01100 380 aaPredicted RBP11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 PDIA5Q14554 519 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 MTF1Q14872 753 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 PLIN2Q99541 437 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 COBLO75128 1261 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 RPN1P04843 607 aaKnown RBP11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 TBC1D10BQ4KMP7 808 aaPredicted RBP11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 LRRC31Q6UY01 552 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 FAM160B2Q86V87 743 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 PNKPQ96T60 521 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 NFE2L3Q9Y4A8 694 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 SPDYE3A6NKU9 549 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 H7C1D1 291 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 CLGNO14967 610 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 TPM1P09493 284 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 CHMP4BP1P59074 171 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 AMPD3Q01432 767 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 NAALADL2Q58DX5 795 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 CCDC91Q7Z6B0 441 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 CCDC47Q96A33 483 aaKnown RBP11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 CDK5RAP3Q96JB5 506 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 MTRQ99707 1265 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
PRPF38B-203ENST00000370025 MYH7BA7E2Y1 1941 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 EDIL3O43854 480 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 ZMYND10O75800 440 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 PLCG1P19174 1290 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 KIF4BQ2VIQ3 1234 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 NLGN2Q8NFZ4 835 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 HSD3B7Q9H2F3 369 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 SCAF8Q9UPN6 1271 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 PHLPP2Q6ZVD8 1323 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 MEIS2O14770 477 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 PLA2G6O60733 806 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 EGFRP00533 1210 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 KIAA1755Q5JYT7 1200 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 KRT79Q5XKE5 535 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 FEM1BQ9UK73 627 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 CCT5P48643 541 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 ZNF658Q5TYW1 1059 aaPredicted RBP11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 JPH2Q9BR39 696 aaPredicted RBP11.1□□□□□ -0.63
PRPF38B-203ENST00000370025 H0YHG0 523 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 STX17P56962 302 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 SPATA1Q5VX52 437 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 MOXD1Q6UVY6 613 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 CENPHQ9H3R5 247 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 ZSCAN12O43309 604 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 HDXQ7Z353 690 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 DEFB129Q9H1M3 183 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
PRPF38B-203ENST00000370025 FRMD3A2A2Y4 597 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 EIF3JO75822 258 aaKnown RBP11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 ERLIN2O94905 339 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 PRELPP51888 382 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 ARHGAP4P98171 946 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 KCNB1Q14721 858 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 DCAF15Q66K64 600 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 ARHGAP27Q6ZUM4 889 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 SMYD4Q8IYR2 804 aaPredicted RBP11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 MMTAG2Q9BU76 263 aaKnown RBP11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 STK17AQ9UEE5 414 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 SAMM50Q9Y512 469 aa11.08□□□□□ -0.63
PRPF38B-203ENST00000370025 CYP3A7-CYP3A51PA0A087WV96 503 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 CYP3A7P24462 503 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 CORO7P57737 925 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 SV2BQ7L1I2 683 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 SNX29Q8TEQ0 813 aa11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 ZNF526Q8TF50 670 aaPredicted RBP11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 BAG1Q99933 345 aaPredicted RBP11.08□□□□□ -0.64
PRPF38B-203ENST00000370025 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms