RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GRIK3Q13003 919 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 NAA30Q147X3 362 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 PLA2G4DQ86XP0 818 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 PRPF38AQ8NAV1 312 aaKnown RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 INTS4Q96HW7 963 aaKnown RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 EIF3CLB5ME19 914 aaKnown RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 ARIH2O95376 493 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 MRPS9P82933 396 aaKnown RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 SP2Q02086 613 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 PKP1Q13835 747 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 FAM160B2Q86V87 743 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 DAGLBQ8NCG7 672 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 NUP88Q99567 741 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 EIF3CQ99613 913 aaKnown RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 GPHNQ9NQX3 736 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-204ENST00000369530 TBX21Q9UL17 535 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 C2orf16Q68DN1 1984 aa7.78□□□□□ -1.16
CSDE1-204ENST00000369530 TMCO5BA8MYB1 307 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 KIAA0355O15063 1070 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 ADORA2AP29274 412 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 PRKG1Q13976 671 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 FAM47AQ5JRC9 791 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 CEP135Q66GS9 1140 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 LARP6Q9BRS8 491 aaKnown RBP7.77□□□□□ -1.16
CSDE1-204ENST00000369530 TMX1Q9H3N1 280 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 PICK1Q9NRD5 415 aa7.77□□□□□ -1.16
CSDE1-204ENST00000369530 DDAH1O94760 285 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 CYP3A4P08684 503 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 CDC27P30260 824 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 GRK4P32298 578 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 ADGRF4Q8IZF3 695 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 GPATCH11Q8N954 259 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 DNERQ8NFT8 737 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 DIS3LQ8TF46 1054 aaKnown RBP7.77□□□□□ -1.17
CSDE1-204ENST00000369530 RUFY2Q8WXA3 655 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 FBXW7Q969H0 707 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 MIEF2Q96C03 454 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.77□□□□□ -1.179e-6■■□□□ 13.2
CSDE1-204ENST00000369530 TELO2Q9Y4R8 837 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 TTC3P53804 2025 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 CYP3A7-CYP3A51PA0A087WV96 503 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 ESYT2A0FGR8 921 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 CYP3A7P24462 503 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 ADCY2Q08462 1091 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 MGAT3Q09327 533 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 RNF214Q8ND24 703 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
CSDE1-204ENST00000369530 A6NJR5 290 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 ARHGAP1Q07960 439 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 MKRN3Q13064 507 aaKnown RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 LRRC26Q2I0M4 334 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 FAM26DQ5JW98 314 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 SLC30A10Q6XR72 485 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 SH3TC2Q8TF17 1288 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 TOX2Q96NM4 488 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 SENP7Q9BQF6 1050 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 RBM8AQ9Y5S9 174 aaKnown RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 TNKSO95271 1327 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 TET1Q8NFU7 2136 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 NOTCH4Q99466 2003 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 A0A087WUV0 522 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 G3V3G9 751 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 SEPT4O43236 478 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 FDPSP14324 419 aaKnown RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 MRPL12P52815 198 aaKnown RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 SART3Q15020 963 aaKnown RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 DCAF8Q5TAQ9 597 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 JAKMIP3Q5VZ66 844 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 TNS4Q8IZW8 715 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 FAM107BQ9H098 131 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 RPS6KL1Q9Y6S9 549 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 MYO16Q9Y6X6 1858 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 POU3F3P20264 500 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 USP5P45974 858 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 FXR1P51114 621 aaKnown RBP eCLIP7.76□□□□□ -1.171e-6■■■□□ 18.2
CSDE1-204ENST00000369530 SPIRE1Q08AE8 756 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 ELF2Q15723 593 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 FAM126BQ8IXS8 530 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 SMARCC2Q8TAQ2 1214 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 STK36Q9NRP7 1315 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 HELZP42694 1942 aaKnown RBP7.76□□□□□ -1.17
CSDE1-204ENST00000369530 TCHHQ07283 1943 aa7.76□□□□□ -1.17
CSDE1-204ENST00000369530 POTEB2H3BUK9 544 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 STXBP3O00186 592 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 RTN2O75298 545 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 LGR5O75473 907 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 TPM1P09493 284 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 BMP3P12645 472 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 ASPRV1Q53RT3 343 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 OTUD7BQ6GQQ9 843 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 TMTC3Q6ZXV5 915 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 DHX38Q92620 1227 aaKnown RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 INPP4AQ96PE3 977 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 DDX20Q9UHI6 824 aaKnown RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 MCM8Q9UJA3 840 aa7.75□□□□□ -1.17
CSDE1-204ENST00000369530 U3KPZ7 1027 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-204ENST00000369530 NFIBO00712 420 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms