RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LRCH2Q5VUJ6 765 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 HAUS3Q68CZ6 603 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 POTEBQ6S5H4 581 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 KCNK18Q7Z418 384 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 MB21D1Q8N884 522 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 MLKLQ8NB16 471 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 LARP4BQ92615 738 aaKnown RBP18.86■□□□□ 0.61
PHGDH-202ENST00000369409 SLC5A5Q92911 643 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 GBA2Q9HCG7 927 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-202ENST00000369409 A1CFQ9NQ94 594 aaKnown RBP18.86■□□□□ 0.61
PHGDH-202ENST00000369409 DACH1Q9UI36 760 aa18.86■□□□□ 0.61
PHGDH-202ENST00000369409 MYL1P05976 194 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 ITGB5P18084 799 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 HERVK_113P62684 666 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 MRPS9P82933 396 aaKnown RBP18.85■□□□□ 0.61
PHGDH-202ENST00000369409 MCM6Q14566 821 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 HYIQ5T013 277 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 FASTKD5Q7L8L6 764 aaKnown RBP18.85■□□□□ 0.61
PHGDH-202ENST00000369409 RAD54LQ92698 747 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 PDCD2LQ9BRP1 358 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 PAGR1Q9BTK6 254 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 NT5C3AQ9H0P0 336 aa18.85■□□□□ 0.61
PHGDH-202ENST00000369409 MED24O75448 989 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 SNAPC2Q13487 334 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 ARHGEF16Q5VV41 709 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 SMYD4Q8IYR2 804 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-202ENST00000369409 ERMNQ8TAM6 284 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 TRIM9Q9C026 710 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 RMND1Q9NWS8 449 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 CYP39A1Q9NYL5 469 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 UNCXA6NJT0 531 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 IKBKBO14920 756 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 GAS7O60861 476 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 PSMD10O75832 226 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 CELF2O95319 508 aaKnown RBP18.84■□□□□ 0.61
PHGDH-202ENST00000369409 MYCLP12524 364 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-202ENST00000369409 FKBP1BP68106 108 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 MYL5Q02045 173 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 NCAPHQ15003 741 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 SV2BQ7L1I2 683 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 WDR11Q9BZH6 1224 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 UBIAD1Q9Y5Z9 338 aa18.84■□□□□ 0.61
PHGDH-202ENST00000369409 SMTNL1A8MU46 457 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 SLC26A4O43511 780 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 CHMP2AO43633 222 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 KLRC4O43908 158 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 AMPD3Q01432 767 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 PABPC4Q13310 644 aaKnown RBP eCLIP18.83■□□□□ 0.69e-7■■■■□ 21.6
PHGDH-202ENST00000369409 GPAT2Q6NUI2 795 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 NIPA1Q7RTP0 329 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 CHST13Q8NET6 341 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 SPATC1LQ9H0A9 340 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 KIAA1024Q9UPX6 916 aa18.83■□□□□ 0.6
PHGDH-202ENST00000369409 POTEFA5A3E0 1075 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 IPO5O00410 1097 aaKnown RBP18.82■□□□□ 0.6
PHGDH-202ENST00000369409 EML1O00423 815 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 BCRP11274 1271 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 CD44P16070 742 aaKnown RBP18.82■□□□□ 0.6
PHGDH-202ENST00000369409 ASIC1P78348 528 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 MKRN3Q13064 507 aaKnown RBP18.82■□□□□ 0.6
PHGDH-202ENST00000369409 POTEGQ6S5H5 508 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 RIOX2Q8IUF8 465 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 C7orf25Q9BPX7 421 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 KCNH7Q9NS40 1196 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 PKD2L1Q9P0L9 805 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 DOCK5Q9H7D0 1870 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 CNMDO75829 334 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 OSBPP22059 807 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 TPM4P67936 248 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 PPP2R5CQ13362 524 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 KMT5BQ4FZB7 885 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 OTOP1Q7RTM1 612 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 CATSPER3Q86XQ3 398 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 TRMT44Q8IYL2 757 aaKnown RBP18.82■□□□□ 0.6
PHGDH-202ENST00000369409 C2orf69Q8N8R5 385 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 TEKT3Q9BXF9 490 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 JADE2Q9NQC1 790 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 STK24Q9Y6E0 443 aa18.82■□□□□ 0.6
PHGDH-202ENST00000369409 LOXHD1Q8IVV2 1947 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 LRRC37A2A6NM11 1700 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 MYMKA6NI61 221 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 E9PMD0 336 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 RPA1P27694 616 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 CCND2P30279 289 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 CYP4A11Q02928 519 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 MTMR1Q13613 665 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 KCNB1Q14721 858 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 ZNF658Q5TYW1 1059 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-202ENST00000369409 KLHL10Q6JEL2 608 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 EIF2AK1Q9BQI3 630 aaKnown RBP18.81■□□□□ 0.6
PHGDH-202ENST00000369409 TRIM5Q9C035 493 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 GDAQ9Y2T3 454 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
PHGDH-202ENST00000369409 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
PHGDH-202ENST00000369409 SPATA31C1P0DKV0 1188 aa18.8■□□□□ 0.6
PHGDH-202ENST00000369409 SARM1Q6SZW1 724 aa18.8■□□□□ 0.6
PHGDH-202ENST00000369409 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
PHGDH-202ENST00000369409 ANKRD35Q8N283 1001 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms