RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 LRRC26Q2I0M4 334 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 BLIDQ8IZY5 108 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 DAGLBQ8NCG7 672 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 CYP2W1Q8TAV3 490 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 TSEN34Q9BSV6 310 aaKnown RBP17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 SPATA31C2B4DYI2 1134 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 GH1P01241 217 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 ICAM3P32942 547 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 WASF1Q92558 559 aa17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
SMPDL3A-201ENST00000368440 MOXD2PA6NHM9 499 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 FIBPO43427 364 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 EDIL3O43854 480 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 GGPS1O95749 300 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 CXCL17Q6UXB2 119 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 FAM177A1Q8N128 213 aaPredicted RBP17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 PCSK9Q8NBP7 692 aaKnown RBP17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 IL27Q8NEV9 243 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 OXER1Q8TDS5 423 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
SMPDL3A-201ENST00000368440 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 NLRX1Q86UT6 975 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 DHX37Q8IY37 1157 aaKnown RBP17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 GPRASP2Q96D09 838 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 MXRA8Q9BRK3 442 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 HTATIP2Q9BUP3 242 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 JADE2Q9NQC1 790 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 PKD2L1Q9P0L9 805 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 TELO2Q9Y4R8 837 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 A6NJR5 290 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 ATP9AO75110 1047 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 TGFB3P10600 412 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 XBP1P17861 261 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 MCM2P49736 904 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 CPT1AP50416 773 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 SLC39A5Q6ZMH5 540 aa17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
SMPDL3A-201ENST00000368440 FAM86B1E9PN63 330 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 MMP3P08254 477 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 MYL3P08590 195 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 CYP3A4P08684 503 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 FAM86B2P0C5J1 330 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 ARP10275 920 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 MTMR1Q13613 665 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 KRT40Q6A162 431 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 DPF3Q92784 378 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 EMID1Q96A84 441 aaPredicted RBP17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 STARD7Q9NQZ5 370 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 PCDH10Q9P2E7 1040 aa17.19■□□□□ 0.34
SMPDL3A-201ENST00000368440 KCNA2P16389 499 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 PURAQ00577 322 aaKnown RBP17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 GUCY1B3Q02153 619 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 NR5A1Q13285 461 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 HSDL1Q3SXM5 330 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 CEP55Q53EZ4 464 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 CYFIP1Q7L576 1253 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 TBCKQ8TEA7 893 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 IGLV3-22A0A075B6J6 115 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 MMP1P03956 469 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 ZNF76P36508 570 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 RTP1P59025 263 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 PSMC6P62333 389 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 LAMC2Q13753 1193 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 SNX17Q15036 470 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 EARS2Q5JPH6 523 aaKnown RBP17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 PPP1R13LQ8WUF5 828 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 GLT1D1Q96MS3 346 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 SPATA33Q96N06 139 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 KCNH7Q9NS40 1196 aa17.18■□□□□ 0.34
SMPDL3A-201ENST00000368440 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 FAM205CA6NFA0 338 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 MEIS1O00470 390 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 ZEB2O60315 1214 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 C7orf61Q8IZ16 206 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 PPTC7Q8NI37 304 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 MLXIPQ9HAP2 919 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 POLR3EQ9NVU0 708 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 GRIN2DO15399 1336 aa17.17■□□□□ 0.34
SMPDL3A-201ENST00000368440 KRT2P35908 639 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 NEDD9Q14511 834 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 INF2Q27J81 1249 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 KRT25Q7Z3Z0 450 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 CDHR1Q96JP9 859 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 SENP7Q9BQF6 1050 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 ELP1O95163 1332 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 BTBD18B2RXH4 712 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 EVI5O60447 810 aa17.16■□□□□ 0.34
SMPDL3A-201ENST00000368440 CIITAP33076 1130 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms