RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 EFCAB8A8MWE9 144 aa20.16■□□□□ 0.82
LMNA-207ENST00000368301 HERVK_113P62684 666 aa20.16■□□□□ 0.82
LMNA-207ENST00000368301 AP3B2Q13367 1082 aa20.16■□□□□ 0.82
LMNA-207ENST00000368301 ZSWIM4Q9H7M6 989 aa20.16■□□□□ 0.82
LMNA-207ENST00000368301 CLCN6P51797 869 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 GPBP1Q86WP2 473 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 GPIHBP1Q8IV16 184 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 NAP1L4Q99733 375 aaKnown RBP20.15■□□□□ 0.82
LMNA-207ENST00000368301 PRDM10Q9NQV6 1147 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
LMNA-207ENST00000368301 UTRNP46939 3433 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 CNTNAP1P78357 1384 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
LMNA-207ENST00000368301 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 MEIS1O00470 390 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 PSMC6P62333 389 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 VWA3BQ502W6 1294 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 ERGIC2Q96RQ1 377 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 FEZ1Q99689 392 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 KDM3AQ9Y4C1 1321 aa20.15■□□□□ 0.82
LMNA-207ENST00000368301 MEA1Q16626 185 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 FAM26FQ5R3K3 315 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 TEX35Q5T0J7 233 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 NCAPH2Q6IBW4 605 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 BTNL9Q6UXG8 535 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 CCDC155Q8N6L0 562 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 TBC1D5Q92609 795 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 GMLQ99445 158 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 NT5C3AQ9H0P0 336 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 NDST4Q9H3R1 872 aa20.14■□□□□ 0.82
LMNA-207ENST00000368301 SPDYE3A6NKU9 549 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 CYP11B2P19099 503 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 ARSHQ5FYA8 562 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 CATSPER3Q86XQ3 398 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 MYOCDQ8IZQ8 938 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 LRRC27Q9C0I9 530 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 SIK3Q9Y2K2 1263 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 PCDHA2Q9Y5H9 948 aa20.14■□□□□ 0.81
LMNA-207ENST00000368301 SREBF1P36956 1147 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 MMP14P50281 582 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 LRRC63Q05C16 580 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 PSMD2Q13200 908 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 KIF4BQ2VIQ3 1234 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 GLIPR1L2Q4G1C9 344 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 ZCWPW2Q504Y3 356 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 FAM83BQ5T0W9 1011 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 RSRC2Q7L4I2 434 aaKnown RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 NELFCDQ8IXH7 590 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 TTLL6Q8N841 843 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 FAM207AQ9NSI2 230 aaPredicted RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 GUCA1BQ9UMX6 200 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 COL2A1P02458 1487 aaPredicted RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 PSME4Q14997 1843 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 ZBED6P86452 979 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 DLGAP5Q15398 846 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 ZYXQ15942 572 aaKnown RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 TSR1Q2NL82 804 aaKnown RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 FKBP15Q5T1M5 1219 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 TMEM39BQ9GZU3 492 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 TMOD2Q9NZR1 351 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 OGFRQ9NZT2 677 aa20.13■□□□□ 0.81
LMNA-207ENST00000368301 RGS17Q9UGC6 210 aaPredicted RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 PUF60Q9UHX1 559 aaKnown RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 HERC5Q9UII4 1024 aaKnown RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
LMNA-207ENST00000368301 PLEKP08567 350 aaPredicted RBP20.12■□□□□ 0.81
LMNA-207ENST00000368301 VIL1P09327 827 aaKnown RBP20.12■□□□□ 0.81
LMNA-207ENST00000368301 SLC12A3P55017 1021 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 Q4G0T1 1027 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 MOXD1Q6UVY6 613 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 MIGA2Q7L4E1 593 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 CCDC84Q86UT8 332 aaPredicted RBP20.12■□□□□ 0.81
LMNA-207ENST00000368301 SLFN12Q8IYM2 578 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 NUP58Q9BVL2 599 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 CTAGE9A4FU28 777 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 RCCD1A6NED2 376 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 MSH4O15457 936 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 SPATA31C1P0DKV0 1188 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 ZSCAN20P17040 1043 aaPredicted RBP20.12■□□□□ 0.81
LMNA-207ENST00000368301 KCNA3P22001 575 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 MAN2A1Q16706 1144 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 CCDC174Q6PII3 467 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 POTEAQ6S8J7 498 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 SAMD1Q6SPF0 538 aaPredicted RBP20.12■□□□□ 0.81
LMNA-207ENST00000368301 NHEJ1Q9H9Q4 299 aaPredicted RBP20.12■□□□□ 0.81
LMNA-207ENST00000368301 ZBTB21Q9ULJ3 1066 aa20.12■□□□□ 0.81
LMNA-207ENST00000368301 DPEP1P16444 411 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 HERC4Q5GLZ8 1057 aaPredicted RBP20.11■□□□□ 0.81
LMNA-207ENST00000368301 RETREG2Q8NC44 543 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 FAM151AQ8WW52 585 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 GLIS2Q9BZE0 524 aaPredicted RBP20.11■□□□□ 0.81
LMNA-207ENST00000368301 ZHX3Q9H4I2 956 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 BCAS3Q9H6U6 928 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 STAT2P52630 851 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 PABPC4Q13310 644 aaKnown RBP eCLIP20.11■□□□□ 0.815e-12■□□□□ 8.9
LMNA-207ENST00000368301 POLD4Q9HCU8 107 aa20.11■□□□□ 0.81
LMNA-207ENST00000368301 BMP2KQ9NSY1 1161 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms