RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ZMYND8Q9ULU4 1186 aaPredicted RBP25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 UBIAD1Q9Y5Z9 338 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 STK36Q9NRP7 1315 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 FIBPO43427 364 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 CABYRO75952 493 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 CDKL5O76039 1030 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 MMP3P08254 477 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 SYN1P17600 705 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 ITGB5P18084 799 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 TLE2Q04725 743 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 CELF3Q5SZQ8 465 aaKnown RBP25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 CCDC148Q8NFR7 591 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 POLR3EQ9NVU0 708 aa25.68■■□□□ 1.7
ECHDC1-203ENST00000368291 A0A0U1RQG5 324 aaPredicted RBP25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 GGPS1O95749 300 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 MYL3P08590 195 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 GNA11P29992 359 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 SREBF1P36956 1147 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 DHX37Q8IY37 1157 aaKnown RBP25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 SLC43A3Q8NBI5 491 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 RASGRP4Q8TDF6 673 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 CRYGNQ8WXF5 182 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 VTI1AQ96AJ9 217 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 TBC1D32Q96NH3 1257 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 EHMT1Q9H9B1 1298 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 LIMCH1Q9UPQ0 1083 aa25.67■■□□□ 1.7
ECHDC1-203ENST00000368291 ARVCFO00192 962 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 SORBS3O60504 671 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 FDPSP14324 419 aaKnown RBP25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 PSMC6P62333 389 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 LAMC2Q13753 1193 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 NPY5RQ15761 445 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 ANKRD33Q7Z3H0 272 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 REXO1Q8N1G1 1221 aaKnown RBP25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 GPRASP2Q96D09 838 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 BACH2Q9BYV9 841 aa25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 UPF2Q9HAU5 1272 aaKnown RBP25.66■■□□□ 1.7
ECHDC1-203ENST00000368291 ITGA7Q13683 1181 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 RABEP1Q15276 862 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 HSDL1Q3SXM5 330 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 BRDTQ58F21 947 aaPredicted RBP25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 NLRX1Q86UT6 975 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 NSUN7Q8NE18 718 aaKnown RBP25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 PPTC7Q8NI37 304 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 CYP2W1Q8TAV3 490 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 JADE2Q9NQC1 790 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 PDLIM7Q9NR12 457 aa25.65■■□□□ 1.7
ECHDC1-203ENST00000368291 KPNA6O60684 536 aa25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 HOXD8P13378 290 aaPredicted RBP25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 NLRP5P59047 1200 aa25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 SH3RF1Q7Z6J0 888 aa25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 TOX2Q96NM4 488 aa25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 MXRA8Q9BRK3 442 aa25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 MTG1Q9BT17 334 aaPredicted RBP25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 ORC3Q9UBD5 711 aaPredicted RBP25.64■■□□□ 1.69
ECHDC1-203ENST00000368291 PQBP1O60828 265 aaKnown RBP25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 ATP9AO75110 1047 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 ARHGAP4P98171 946 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 FAAP100Q0VG06 881 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 MCTP2Q6DN12 878 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 BICD2Q8TD16 824 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 SPATA33Q96N06 139 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 SENP7Q9BQF6 1050 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 GJB4Q9NTQ9 266 aa25.63■■□□□ 1.69
ECHDC1-203ENST00000368291 M0R2N6 131 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 EDIL3O43854 480 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 KCNA2P16389 499 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 NEDD9Q14511 834 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 CYFIP1Q7L576 1253 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 FAM126BQ8IXS8 530 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 FAM177A1Q8N128 213 aaPredicted RBP25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 KAT2BQ92831 832 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 PCDHA4Q9UN74 947 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 TELO2Q9Y4R8 837 aa25.62■■□□□ 1.69
ECHDC1-203ENST00000368291 TRIM43BA6NCK2 446 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 JAK2O60674 1132 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 CYP3A4P08684 503 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 MTMR1Q13613 665 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 DGKDQ16760 1214 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 DAGLBQ8NCG7 672 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 TRIM43Q96BQ3 446 aaPredicted RBP25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 PHF20Q9BVI0 1012 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 MLXIPQ9HAP2 919 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 KCNJ14Q9UNX9 436 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 MROH7Q68CQ1 1323 aa25.61■■□□□ 1.69
ECHDC1-203ENST00000368291 TRIP12Q14669 1992 aaPredicted RBP25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 MEIS1O00470 390 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 MAFGO15525 162 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 CD4P01730 458 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 CLTBP09497 229 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 CEP55Q53EZ4 464 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 METTL7BQ6UX53 244 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 BLIDQ8IZY5 108 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 PPP1R13LQ8WUF5 828 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 CDHR1Q96JP9 859 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 PRO3102Q9H379 93 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 KCNH7Q9NS40 1196 aa25.6■■□□□ 1.69
ECHDC1-203ENST00000368291 DCDC2CA8MYV0 355 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 FAM86B1E9PN63 330 aa25.59■■□□□ 1.69
ECHDC1-203ENST00000368291 FAM86B2P0C5J1 330 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms