RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 SREK1Q8WXA9 508 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 GMLQ99445 158 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.44□□□□□ -1.547e-6■■■■□ 21.2
ECHDC1-201ENST00000368287 TANGO6Q9C0B7 1094 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 CSRNP2Q9H175 543 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 NGRNQ9NPE2 291 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 PPP1R1BQ9UD71 204 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 BACE2Q9Y5Z0 518 aa5.44□□□□□ -1.54
ECHDC1-201ENST00000368287 TRBV23OR9-2A0A075B6M9 112 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 NPHP3-ACAD11A0A0J9YXS1 232 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 SGSM2O43147 1006 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 PPFIA2O75334 1257 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 MCM7P33993 719 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 ADAM9Q13443 819 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 NRN1LQ496H8 165 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 IGFL4Q6B9Z1 124 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 FAM126BQ8IXS8 530 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 AMER2Q8N7J2 671 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 ZSWIM3Q96MP5 696 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 TRIM8Q9BZR9 551 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 MEGF9Q9H1U4 602 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 TNFRSF18Q9Y5U5 241 aa5.43□□□□□ -1.54
ECHDC1-201ENST00000368287 C7orf72A4D263 438 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 GUCY2CP25092 1073 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 GIPRP48546 466 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 NKX3-2P78367 333 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 DPY19L1Q2PZI1 675 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 DNAJC10Q8IXB1 793 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 TAB3Q8N5C8 712 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 ADCY4Q8NFM4 1077 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 SEC14L1Q92503 715 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 ANAPC16Q96DE5 110 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 ZNF503Q96F45 646 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 YIPF4Q9BSR8 244 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 MARCH2Q9P0N8 246 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 FTSJ1Q9UET6 329 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 SLC12A7Q9Y666 1083 aa5.42□□□□□ -1.54
ECHDC1-201ENST00000368287 C2orf71A6NGG8 1288 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 VAMP4O75379 141 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 CYP7B1O75881 506 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 HNRNPA0Q13151 305 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 PLEKHO2Q8TD55 490 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 DRC1Q96MC2 740 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 CLIC6Q96NY7 704 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 ADOQ96SZ5 270 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 ZFR2Q9UPR6 939 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 ZDHHC9Q9Y397 364 aa5.41□□□□□ -1.54
ECHDC1-201ENST00000368287 CBFA2T2O43439 604 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 INHBCP55103 352 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 PTH1RQ03431 593 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 PPP2R5EQ16537 467 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 CR1LQ2VPA4 569 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 MILR1Q7Z6M3 343 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 SHDQ96IW2 340 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 BARX1Q9HBU1 254 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 WHRNQ9P202 907 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 CROTQ9UKG9 612 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 R3HCC1Q9Y3T6 440 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 MRVI1Q9Y6F6 885 aa5.4□□□□□ -1.54
ECHDC1-201ENST00000368287 A0A087X1B8 175 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 NARSO43776 548 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 GTF2F1P35269 517 aaKnown RBP eCLIP5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 ETFBP38117 255 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 AMPD2Q01433 879 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 NFATC3Q12968 1075 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 USP39Q53GS9 565 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 TNNI3KQ59H18 835 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 C19orf47Q8N9M1 422 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 ZCCHC14Q8WYQ9 949 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 DNAJC2Q99543 621 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-201ENST00000368287 THBDP07204 575 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 ATP2B1P20020 1258 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 SLC6A11P48066 632 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 CASP7P55210 303 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 SF3A1Q15459 793 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 ZYXQ15942 572 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 LSM12Q3MHD2 195 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 GNRHR2Q96P88 292 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 CRAMP1Q96RY5 1269 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 PHAXQ9H814 394 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 ZNF408Q9H9D4 720 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 BTG4Q9NY30 223 aa5.38□□□□□ -1.55
ECHDC1-201ENST00000368287 A0A1W2PQH9 124 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 FOXS1O43638 330 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 GNPTABQ3T906 1256 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 TRMT10BQ6PF06 316 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 TEX2Q8IWB9 1127 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 NEU4Q8WWR8 484 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 ZG16BQ96DA0 208 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 WRNIP1Q96S55 665 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 HAUS7Q99871 368 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 PRKAG3Q9UGI9 489 aa5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 ZNF214Q9UL59 606 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-201ENST00000368287 LOC105371045A0A1W2PR82 267 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms