RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 XAGE2Q96GT9 111 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 EPAS1Q99814 870 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 DESI2Q9BSY9 194 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
TPR-201ENST00000367478 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
TPR-201ENST00000367478 MRGBPQ9NV56 204 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 APOBEC2Q9Y235 224 aaKnown RBP13.41□□□□□ -0.26
TPR-201ENST00000367478 CIITAP33076 1130 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 SMCR8Q8TEV9 937 aaPredicted RBP13.41□□□□□ -0.26
TPR-201ENST00000367478 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
TPR-201ENST00000367478 DBNLQ9UJU6 430 aaKnown RBP13.41□□□□□ -0.26
TPR-201ENST00000367478 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
TPR-201ENST00000367478 PPARDQ03181 441 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 SYT2Q8N9I0 419 aaPredicted RBP13.4□□□□□ -0.26
TPR-201ENST00000367478 HLA-DPA1P20036 260 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 DAB2P98082 770 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 RASSF7Q02833 373 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 STAMBPL1Q96FJ0 436 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 PPP1R13BQ96KQ4 1090 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 RRAGDQ9NQL2 400 aaPredicted RBP13.4□□□□□ -0.26
TPR-201ENST00000367478 IRAK4Q9NWZ3 460 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 FOSP01100 380 aaPredicted RBP13.4□□□□□ -0.26
TPR-201ENST00000367478 MESDQ14696 234 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.26
TPR-201ENST00000367478 NRBP2Q9NSY0 501 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 MEIS1O00470 390 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 VAMP4O75379 141 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 SURF1Q15526 300 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.262e-7■□□□□ 10.1
TPR-201ENST00000367478 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 MMS22LQ6ZRQ5 1243 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 TUBGCP2Q9BSJ2 902 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 KDM1AO60341 852 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 RNF217Q8TC41 542 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 KIF9Q9HAQ2 790 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 MRFAP1Q9Y605 127 aa13.4□□□□□ -0.26
TPR-201ENST00000367478 PAPOLAP51003 745 aaKnown RBP13.4□□□□□ -0.27
TPR-201ENST00000367478 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.27
TPR-201ENST00000367478 PTK2BQ14289 1009 aa13.4□□□□□ -0.27
TPR-201ENST00000367478 KRT33BQ14525 404 aa13.4□□□□□ -0.27
TPR-201ENST00000367478 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.27
TPR-201ENST00000367478 FRA10AC1Q70Z53 315 aa13.4□□□□□ -0.27
TPR-201ENST00000367478 KIAA2013Q8IYS2 634 aa13.4□□□□□ -0.27
TPR-201ENST00000367478 CPXCR1Q8N123 301 aa13.4□□□□□ -0.27
TPR-201ENST00000367478 SERTAD1Q9UHV2 236 aa13.4□□□□□ -0.27
TPR-201ENST00000367478 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 ZNF263O14978 683 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 COPB1P53618 953 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 SNX19Q92543 992 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 KLC2Q9H0B6 622 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 MPP6Q9NZW5 540 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 NSMFQ6X4W1 530 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 SCG3Q8WXD2 468 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 NCLNQ969V3 563 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 SCG2P13521 617 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 ADAT2Q7Z6V5 191 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 DARS2Q6PI48 645 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 DEAF1O75398 565 aaPredicted RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 DDAH1O94760 285 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 MMEP08473 750 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 PAIP2BQ9ULR5 123 aaKnown RBP13.39□□□□□ -0.27
TPR-201ENST00000367478 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 TJP3O95049 919 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 SPATA5Q8NB90 893 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 EDEM3Q9BZQ6 932 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 MYO10Q9HD67 2058 aa13.39□□□□□ -0.27
TPR-201ENST00000367478 TECP42680 631 aa13.38□□□□□ -0.27
TPR-201ENST00000367478 MAGEB5Q9BZ81 275 aa13.38□□□□□ -0.27
TPR-201ENST00000367478 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
TPR-201ENST00000367478 ABCC12Q96J65 1359 aa13.38□□□□□ -0.27
TPR-201ENST00000367478 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
TPR-201ENST00000367478 TRPC1P48995 793 aa13.38□□□□□ -0.27
TPR-201ENST00000367478 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
TPR-201ENST00000367478 CDC37Q16543 378 aaPredicted RBP13.38□□□□□ -0.27
TPR-201ENST00000367478 FAM26FQ5R3K3 315 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms