RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 TANC1Q9C0D5 1861 aa11.54□□□□□ -0.56
NUP43-203ENST00000367404 FRMPD2Q68DX3 1309 aaPredicted RBP11.54□□□□□ -0.56
NUP43-203ENST00000367404 CALML3P27482 149 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 PDE4DQ08499 809 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 RBL2Q08999 1139 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 BFSP2Q13515 415 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 FAM47CQ5HY64 1035 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 TICAM2Q86XR7 235 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 COPS5Q92905 334 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 MPHOSPH6Q99547 160 aaKnown RBP11.53□□□□□ -0.56
NUP43-203ENST00000367404 C1QTNF1Q9BXJ1 281 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 MAF1Q9H063 256 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 HELLSQ9NRZ9 838 aa11.53□□□□□ -0.56
NUP43-203ENST00000367404 LPXNO60711 386 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 FGAP02671 866 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 PCP11498 1178 aaKnown RBP11.52□□□□□ -0.57
NUP43-203ENST00000367404 GPNMBQ14956 572 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 KRT40Q6A162 431 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 CCDC62Q6P9F0 684 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 RETREG2Q8NC44 543 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 AFAP1L1Q8TED9 768 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 PPP1R13LQ8WUF5 828 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 EVI5LQ96CN4 794 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 TTC14Q96N46 770 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 CERS4Q9HA82 394 aa11.52□□□□□ -0.57
NUP43-203ENST00000367404 NCOR1O75376 2440 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 A0A0D9SFI3 127 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 B4DLN1 442 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 TLL1O43897 1013 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 CXCL10P02778 98 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 MMP3P08254 477 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 TXNP10599 105 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 MRPL12P52815 198 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 WDR5P61964 334 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 ARHGAP1Q07960 439 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 GRB10Q13322 594 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 SKIV2LQ15477 1246 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 SPRED2Q7Z698 418 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 ARNTL2Q8WYA1 636 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 DHX38Q92620 1227 aaKnown RBP11.51□□□□□ -0.57
NUP43-203ENST00000367404 KAT2BQ92831 832 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 FAM227BQ96M60 508 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 FTOQ9C0B1 505 aaKnown RBP eCLIP11.51□□□□□ -0.57
NUP43-203ENST00000367404 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
NUP43-203ENST00000367404 LCHNA4D1U4 455 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 KIF28PB7ZC32 967 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
NUP43-203ENST00000367404 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
NUP43-203ENST00000367404 PTGISQ16647 500 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 MCMDC2Q4G0Z9 681 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 GDF6Q6KF10 455 aaPredicted RBP11.5□□□□□ -0.57
NUP43-203ENST00000367404 ZNF589Q86UQ0 364 aaPredicted RBP11.5□□□□□ -0.57
NUP43-203ENST00000367404 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 AFG1LQ8WV93 481 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 HLA-CQ95604 372 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 FAM122AQ96E09 287 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 LMCD1Q9NZU5 365 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 NOD1Q9Y239 953 aa11.5□□□□□ -0.57
NUP43-203ENST00000367404 COL4A4P53420 1690 aaPredicted RBP11.49□□□□□ -0.57
NUP43-203ENST00000367404 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 GH1P01241 217 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 SELPP16109 830 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 KCNJ6P48051 423 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 NT5C2P49902 561 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 PDE1AP54750 535 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 DEFB103AP81534 67 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 LRRC8DQ7L1W4 858 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 SYTL5Q8TDW5 730 aaPredicted RBP11.49□□□□□ -0.57
NUP43-203ENST00000367404 ZNF516Q92618 1163 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
NUP43-203ENST00000367404 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 COL20A1Q9P218 1284 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 ABCB11O95342 1321 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 NEDD4P46934 1319 aa11.49□□□□□ -0.57
NUP43-203ENST00000367404 SCN5AQ14524 2016 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 NBNO60934 754 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 GJB5O95377 273 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 F2P00734 622 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 HAND2P61296 217 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 CDC37Q16543 378 aaPredicted RBP11.48□□□□□ -0.57
NUP43-203ENST00000367404 LY6KQ17RY6 165 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 TCTN1Q2MV58 587 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 TRIM71Q2Q1W2 868 aaKnown RBP11.48□□□□□ -0.57
NUP43-203ENST00000367404 USH1GQ495M9 461 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 DGKHQ86XP1 1220 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 GDPD5Q8WTR4 605 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 IWS1Q96ST2 819 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 LRFN3Q9BTN0 628 aa11.48□□□□□ -0.57
NUP43-203ENST00000367404 EPHX3Q9H6B9 360 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms