RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 MFAP3P55082 362 aa7.9□□□□□ -1.15
SYNE1-208ENST00000367256 C2orf54Q08AI8 447 aa7.9□□□□□ -1.15
SYNE1-208ENST00000367256 TCIRG1Q13488 830 aa7.9□□□□□ -1.15
SYNE1-208ENST00000367256 SYMPKQ92797 1274 aaKnown RBP7.9□□□□□ -1.15
SYNE1-208ENST00000367256 OSBPL3Q9H4L5 887 aa7.9□□□□□ -1.15
SYNE1-208ENST00000367256 PCDHA7Q9UN72 937 aa7.9□□□□□ -1.15
SYNE1-208ENST00000367256 NOP14P78316 857 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 ADAM9Q13443 819 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 FBXO18Q8NFZ0 1043 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 GIPC2Q8TF65 315 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 FOXP1Q9H334 677 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 FANCLQ9NW38 375 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TSPOAP1O95153 1857 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 POLR2MP0CAP2 368 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CYP4F22Q6NT55 531 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 DAAM1Q9Y4D1 1078 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 NAA35Q5VZE5 725 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 FAM160B1Q5W0V3 765 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 LPIN2Q92539 896 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 STAP2Q9UGK3 403 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CAPN11Q9UMQ6 739 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 DIS3Q9Y2L1 958 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 COL4A3BPQ9Y5P4 624 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 ATP10DQ9P241 1426 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TTC37Q6PGP7 1564 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 ZNF654Q8IZM8 581 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 SSH3Q8TE77 659 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CFAP73A6NFT4 308 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 LRRIQ4A6NIV6 560 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 IPO5O00410 1097 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 PPP1R12AO14974 1030 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 SPAG7O75391 227 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 NCF2P19878 526 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CLCN6P51797 869 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 SLC39A14Q15043 492 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 SARM1Q6SZW1 724 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 DPP8Q6V1X1 898 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 SLC38A10Q9HBR0 1119 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 SLC39A2Q9NP94 309 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 MYOM2P54296 1465 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CHEK2O96017 543 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 ARHGDIAP52565 204 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 NIM1KQ8IY84 436 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 PRPF38AQ8NAV1 312 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CNOT6LQ96LI5 555 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 OLFM3Q96PB7 478 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 RPS6KC1Q96S38 1066 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 PALMDQ9NP74 551 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 MRPL40Q9NQ50 206 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 MICAL3Q7RTP6 2002 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TMEM247A6NEH6 219 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CASP14P31944 242 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 FAM173BQ6P4H8 233 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 VSTM4Q8IW00 320 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 NEK9Q8TD19 979 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 ATP2B4P23634 1241 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TFDP1Q14186 410 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 GRAMD1BQ3KR37 738 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 ZNF653Q96CK0 615 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 TTC1Q99614 292 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 NDUFB9Q9Y6M9 179 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CUL4AQ13619 759 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 PODNQ7Z5L7 613 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CDC26Q8NHZ8 85 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 PAWRQ96IZ0 340 aaKnown RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 BPIFA3Q9BQP9 254 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
SYNE1-208ENST00000367256 CCNL1Q9UK58 526 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-208ENST00000367256 RASGRF2O14827 1237 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 FAM47AQ5JRC9 791 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 DARS2Q6PI48 645 aaKnown RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 SAAL1Q96ER3 474 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TBK1Q9UHD2 729 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 CCDC188H7C350 402 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MAPK13O15264 365 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TADA3O75528 432 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MAPK4P31152 587 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 THOC5Q13769 683 aaKnown RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 FAM47CQ5HY64 1035 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TRIM67Q6ZTA4 783 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 KRT26Q7Z3Y9 468 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 BBS5Q8N3I7 341 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 DNAAF3Q8N9W5 541 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 DYDC2Q96IM9 177 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 PHACTR3Q96KR7 559 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MLXIPQ9HAP2 919 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MRFAP1Q9Y605 127 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 DYNLT1P63172 113 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 SEMA3FQ13275 785 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 DBNDD2Q9BQY9 259 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 C19orf44Q9H6X5 657 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 SUGCTQ9HAC7 445 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 GTPBP10A4D1E9 387 aaKnown RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 SYCE1LA8MT33 242 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 CFLARO15519 480 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 SLCO1A2P46721 670 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms