RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SDCCAG3Q96C92 435 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 RMDN1Q96DB5 314 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TBC1D8O95759 1140 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 USHBP1Q8N6Y0 703 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ADCY2Q08462 1091 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CALML6Q8TD86 181 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 FAM162AQ96A26 154 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 FAR2Q96K12 515 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ERBB3P21860 1342 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 EVPLLA8MZ36 301 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 FAM107AO95990 144 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 BCRP11274 1271 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CDH2P19022 906 aaPredicted RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PASKQ96RG2 1323 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 IL9RQ01113 521 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 LLGL1Q15334 1064 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 DDX25Q9UHL0 483 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PPP2R3CQ969Q6 453 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 LBHD1Q9BQE6 289 aaPredicted RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TRAIPQ9BWF2 469 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 AFF4Q9UHB7 1163 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CSDE1O75534 798 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 FKBP9O95302 570 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 APOEP02649 317 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 POLR2BP30876 1174 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PSMD2Q13200 908 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 STX8Q9UNK0 236 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 NCAPD2Q15021 1401 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 C16orf96A6NNT2 1141 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 FLIIQ13045 1269 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 RASA3Q14644 834 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CASP8Q14790 479 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PACS2Q86VP3 889 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 DCDC2Q9UHG0 476 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 VPS9D1Q9Y2B5 631 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 AHCYL1O43865 530 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ZMYND10O75800 440 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CHGBP05060 677 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 GRIN1Q05586 938 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PTK2BQ14289 1009 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PPP2R5DQ14738 602 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CADPS2Q86UW7 1296 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ARID5BQ14865 1188 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TAF11Q15544 211 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 VPS37AQ8NEZ2 397 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 NELFBQ8WX92 580 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 EDC3Q96F86 508 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TINF2Q9BSI4 451 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 SYNPO2Q9UMS6 1093 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM75PA6NK02 468 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC93Q567U6 631 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 KLHL7Q8IXQ5 586 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 BOLA2Q9H3K6 86 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 DNAJC3Q13217 504 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ADCK1Q86TW2 530 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 MKL1Q969V6 931 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CDCA7Q9BWT1 371 aaPredicted RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 N4BP3O15049 544 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CALUO43852 315 aaPredicted RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PTPROQ16827 1216 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 DHX58Q96C10 678 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TRPV6Q9H1D0 765 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 PLK2Q9NYY3 685 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TUBGCP4Q9UGJ1 667 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 HNRNPCL2B2RXH8 293 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 E2F5Q15329 346 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TRMT44Q8IYL2 757 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 MTMR12Q9C0I1 747 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ALOX5P09917 674 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 CNGB3Q9NQW8 809 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 MROH5Q6ZUA9 1318 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 MOV10Q9HCE1 1003 aaKnown RBP4.07□□□□□ -1.76
SYNE1-207ENST00000367255 SYNGAP1Q96PV0 1343 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 TTC13Q8NBP0 860 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 FKBP10Q96AY3 582 aa4.07□□□□□ -1.76
SYNE1-207ENST00000367255 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 RARS2Q5T160 578 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 TMC4Q7Z404 712 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 DNAAF5Q86Y56 855 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 APOL4Q9BPW4 351 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NUP85Q9BW27 656 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 EEF2KO00418 725 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 PDE6AP16499 860 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MUTP22033 750 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 AOC3Q16853 763 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 LARP1Q6PKG0 1096 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 AFAP1Q8N556 730 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 QKIQ96PU8 341 aaKnown RBP eCLIP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 RTEL1Q9NZ71 1219 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SERPINI2O75830 405 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 A8MXQ7 604 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 AGTP01019 485 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 APOA1P02647 267 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SYKP43405 635 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NAB1Q13506 487 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MREGQ8N565 214 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 GOLM1Q8NBJ4 401 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms