RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 TPM2P07951 284 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 ZNF18P17022 549 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 PTPRAP18433 802 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 CASP1P29466 404 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 PPP1R2P41236 205 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 PAK1Q13153 545 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 UBE2SQ16763 222 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 FBXO11Q86XK2 927 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 CCDC112Q8NEF3 446 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 STK17AQ9UEE5 414 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 DDX25Q9UHL0 483 aaKnown RBP12.21□□□□□ -0.46
H3F3A-202ENST00000366814 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.46
H3F3A-202ENST00000366814 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 BTBD19C9JJ37 291 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 PLCG1P19174 1290 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 USP11P51784 963 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 SPAG1Q07617 926 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 BTNL9Q6UXG8 535 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 SIAH1Q8IUQ4 282 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 VSTM4Q8IW00 320 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 C17orf53Q8N3J3 647 aaPredicted RBP12.2□□□□□ -0.46
H3F3A-202ENST00000366814 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 KCNH4Q9UQ05 1017 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 CTNND2Q9UQB3 1225 aa12.2□□□□□ -0.46
H3F3A-202ENST00000366814 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 CXCL11O14625 94 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 TDP2O95551 362 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
H3F3A-202ENST00000366814 STAT2P52630 851 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
H3F3A-202ENST00000366814 NAALADL2Q58DX5 795 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 KRT79Q5XKE5 535 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 PRIMPOLQ96LW4 560 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 ZBTB21Q9ULJ3 1066 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 CCP110O43303 1012 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
H3F3A-202ENST00000366814 STX17P56962 302 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 CCZ1BP86790 482 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 CCZ1P86791 482 aaPredicted RBP12.19□□□□□ -0.46
H3F3A-202ENST00000366814 MOXD1Q6UVY6 613 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 MTRQ99707 1265 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 ANO3Q9BYT9 981 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 TMX2Q9Y320 296 aa12.19□□□□□ -0.46
H3F3A-202ENST00000366814 KDM3AQ9Y4C1 1321 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 PSMA7O14818 248 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 SLC26A4O43511 780 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 SLC37A4O43826 429 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 RHOBTB3O94955 611 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 CAP2P40123 477 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 KCNJ6P48051 423 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 SP3Q02447 781 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 PKN2Q16513 984 aaKnown RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 HSP90AA4PQ58FG1 418 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 GADL1Q6ZQY3 521 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 FASTKD5Q7L8L6 764 aaKnown RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 ANKRD23Q86SG2 305 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 NELFBQ8WX92 580 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 ERO1AQ96HE7 468 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 PLIN2Q99541 437 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 C7orf25Q9BPX7 421 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
H3F3A-202ENST00000366814 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
H3F3A-202ENST00000366814 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 PDHXO00330 501 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 ASNSP08243 561 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 ASIC1P78348 528 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 ARID5BQ14865 1188 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USH1GQ495M9 461 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 CDKAL1Q5VV42 579 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
H3F3A-202ENST00000366814 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 A0A1B0GTH6 734 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L15C9J2P7 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L13C9JLJ4 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L11C9JVI0 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L18D6R9N7 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L22D6RA61 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L17D6RBQ6 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L19D6RCP7 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L20D6RJB6 530 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 TPM1P09493 284 aa12.17□□□□□ -0.46
H3F3A-202ENST00000366814 USP17L24Q0WX57 530 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms