RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 METTL23Q86XA0 190 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 NEK9Q8TD19 979 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 PANX2Q96RD6 677 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 ZBED6P86452 979 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 ADCY2Q08462 1091 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 DMTNQ08495 405 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 IFRD2Q12894 506 aaPredicted RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 THOC5Q13769 683 aaKnown RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 TMED2Q15363 201 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 COPRSQ9NQ92 184 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 PCDHA1Q9Y5I3 950 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 ZMYM1Q5SVZ6 1142 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 KCTD16Q68DU8 428 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 MIS18BP1Q6P0N0 1132 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 PPP4R3CPQ6ZMV5 832 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 ENOX1Q8TC92 643 aaKnown RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 ATP6V1E2Q96A05 226 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 CDHR1Q96JP9 859 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 FAM96AQ9H5X1 160 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 SLFN14P0C7P3 912 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 ACTN1P12814 892 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 IFNAR2P48551 515 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 C6orf118Q5T5N4 469 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 NAA35Q5VZE5 725 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 NACC1Q96RE7 527 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 MRPL46Q9H2W6 279 aaKnown RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 IQANK1A0A1B0GTG1 560 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
HIPK1-202ENST00000361587 KIF22Q14807 665 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 KIFC3Q9BVG8 833 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 OSBPL3Q9H4L5 887 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 PYCARDQ9ULZ3 195 aa11.48□□□□□ -0.57
HIPK1-202ENST00000361587 KDM5AP29375 1690 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 CASP2P42575 452 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 CMTR1Q8N1G2 835 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 GIPC2Q8TF65 315 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SKA2Q8WVK7 121 aaPredicted RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SLC38A10Q9HBR0 1119 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SMYD2Q9NRG4 433 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SDR42E1Q8WUS8 393 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 ATP8A1Q9Y2Q0 1164 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 THRAP3Q9Y2W1 955 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 LMTK3Q96Q04 1460 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 TMEM232C9JQI7 657 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 ABL1P00519 1130 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 PYGBP11216 843 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 XPAP23025 273 aaPredicted RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 USP14P54578 494 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 PLTPP55058 493 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 KRT39Q6A163 491 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SLC7A3Q8WY07 619 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SNX25Q9H3E2 840 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 IL1RL1Q01638 556 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 TCP11X2Q5H9J9 407 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 KRT80Q6KB66 452 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 LRRC43Q8N309 656 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 DHX38Q92620 1227 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 NUDCD1Q96RS6 583 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 ZNF577Q9BSK1 485 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 PAGR1Q9BTK6 254 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 UPF3AQ9H1J1 476 aaKnown RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 PALD1Q9ULE6 856 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 PTPRTO14522 1441 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 NNTQ13423 1086 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 EMBQ6PCB8 327 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 TTC25Q96NG3 672 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 CENPKQ9BS16 269 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
HIPK1-202ENST00000361587 SCINQ9Y6U3 715 aa11.47□□□□□ -0.57
HIPK1-202ENST00000361587 ABCC2Q92887 1545 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 RASGRF2O14827 1237 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 CHEK2O96017 543 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 PEX19P40855 299 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 ART3Q13508 389 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 MAN1B1Q9UKM7 699 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 DCTN3O75935 186 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 TAF11Q15544 211 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 PTPROQ16827 1216 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 TMTC4Q5T4D3 741 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 VSTM4Q8IW00 320 aa11.46□□□□□ -0.57
HIPK1-202ENST00000361587 ST13P4Q8IZP2 240 aaPredicted RBP11.46□□□□□ -0.57
HIPK1-202ENST00000361587 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.46□□□□□ -0.57
HIPK1-202ENST00000361587 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.58
HIPK1-202ENST00000361587 CCDC188H7C350 402 aa11.46□□□□□ -0.58
HIPK1-202ENST00000361587 MAPK13O15264 365 aa11.46□□□□□ -0.58
HIPK1-202ENST00000361587 TTLL1O95922 423 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms