RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 MTUS1Q9ULD2 1270 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 NR2F2P24468 414 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 HNRNPH1P31943 449 aaKnown RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 SLC8A1P32418 973 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 CETN2P41208 172 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 SEC24CP53992 1094 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 EXOC3L4Q17RC7 722 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 EHD4Q9H223 541 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 ACTR5Q9H9F9 607 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 SPDYE3A6NKU9 549 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 FANCGO15287 622 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 SPOPO43791 374 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC197Q8NCU1 140 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
EPHB4-202ENST00000360620 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 FOXP2O15409 715 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 KCNQ2O43526 872 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 AARSP49588 968 aaKnown RBP eCLIP13.12□□□□□ -0.31
EPHB4-202ENST00000360620 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 STAG2Q8N3U4 1231 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
EPHB4-202ENST00000360620 PLCB1Q9NQ66 1216 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 MEGF6O75095 1541 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 BACH1O14867 736 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 CALUO43852 315 aaPredicted RBP13.12□□□□□ -0.31
EPHB4-202ENST00000360620 GCNT3O95395 438 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 PRDX5P30044 214 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 PLS1Q14651 629 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 ZRSR2Q15696 482 aaKnown RBP13.12□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 DDX12PQ92771 950 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 IFT74Q96LB3 600 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 PIGSQ96S52 555 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 KANSL2Q9H9L4 492 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 KIAA1024Q9UPX6 916 aa13.12□□□□□ -0.31
EPHB4-202ENST00000360620 POTEMA6NI47 508 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 LRRC10BA6NIK2 292 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 MYO1FO00160 1098 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 SYF2O95926 243 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 PKN1Q16512 942 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 ALKBH5Q6P6C2 394 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 HDAC7Q8WUI4 952 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC77Q9BR77 488 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 DDX47Q9H0S4 455 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 NEBLO76041 1014 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 CUL1Q13616 776 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 MSL3Q8N5Y2 521 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 EPN3Q9H201 632 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 INTS9Q9NV88 658 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 ANKRD62A6NC57 917 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 GMNCA6NCL1 334 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 PBKQ96KB5 322 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 DDX25Q9UHL0 483 aaKnown RBP13.11□□□□□ -0.31
EPHB4-202ENST00000360620 STK38LQ9Y2H1 464 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
EPHB4-202ENST00000360620 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 PLTPP55058 493 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 CROCCP2Q86T23 111 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 UBL4BQ8N7F7 174 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 MICAL1Q8TDZ2 1067 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 RUBCNQ92622 972 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 COA7Q96BR5 231 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 RNPC3Q96LT9 517 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 CEP72Q9P209 647 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms