RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TRPC5Q9UL62 973 aaPredicted RBP10.46□□□□□ -0.73
CUX1-203ENST00000360264 KRT33BQ14525 404 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 FGFR1OP2Q9NVK5 253 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 PPP6R2O75170 966 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 MSH2P43246 934 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 THOC5Q13769 683 aaKnown RBP10.46□□□□□ -0.74
CUX1-203ENST00000360264 PBKQ96KB5 322 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 ZNF804BA4D1E1 1349 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 DNAJC13O75165 2243 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 DNAAF3Q8N9W5 541 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 TCP11Q8WWU5 503 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.74
CUX1-203ENST00000360264 TUBGCP2Q9BSJ2 902 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 CCDC127Q96BQ5 260 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 GDAP1L1Q96MZ0 367 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 DDX50Q9BQ39 737 aaKnown RBP10.46□□□□□ -0.74
CUX1-203ENST00000360264 RECQLP46063 649 aaPredicted RBP10.46□□□□□ -0.74
CUX1-203ENST00000360264 TSPY1Q01534 308 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 FAM47AQ5JRC9 791 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 GCNT4Q9P109 453 aa10.46□□□□□ -0.74
CUX1-203ENST00000360264 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 RNF123Q5XPI4 1314 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 GNAT1P11488 350 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 SESN3P58005 492 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 RCN2Q14257 317 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 SLFN13Q68D06 897 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
CUX1-203ENST00000360264 FAM160B2Q86V87 743 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 USP17L21D6R901 530 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 ZAP70P43403 619 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 FAM196AQ6ZSG2 479 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 PHACTR3Q96KR7 559 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 HGSO14964 777 aaPredicted RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 ARHGDIAP52565 204 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 GNGT1P63211 74 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 PNOCQ13519 176 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 SCG3Q8WXD2 468 aaKnown RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 TRIM33Q9UPN9 1127 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 DAAM1Q9Y4D1 1078 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 MXI1P50539 228 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 FBXL13Q8NEE6 735 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 EPN1Q9Y6I3 576 aaPredicted RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 HOXD10P28358 340 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 CDC25BP30305 580 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 EPHB4P54760 987 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 FRA10AC1Q70Z53 315 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 TRIM62Q9BVG3 475 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 XPO4Q9C0E2 1151 aaKnown RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 MAP3K15Q6ZN16 1313 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 TAF1BQ53T94 588 aaPredicted RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 ADKP55263 362 aaKnown RBP10.45□□□□□ -0.74
CUX1-203ENST00000360264 NR1H3Q13133 447 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 DNAJC24Q6P3W2 148 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 RABGGTAQ92696 567 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 MXD3Q9BW11 206 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 MAGEB5Q9BZ81 275 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 ANGPTL2Q9UKU9 493 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 IQANK1A0A1B0GTG1 560 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 ATG3Q9NT62 314 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 KIAA0556O60303 1618 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 ECEL1O95672 775 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 ARHGEF25Q86VW2 580 aa10.45□□□□□ -0.74
CUX1-203ENST00000360264 TNKSO95271 1327 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 SCNN1DP51172 638 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 KYAT1Q16773 422 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 SKAP1Q86WV1 359 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 DCLK2Q8N568 766 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 LARP4BQ92615 738 aaKnown RBP10.44□□□□□ -0.74
CUX1-203ENST00000360264 FAM167AQ96KS9 214 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 SCINQ9Y6U3 715 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 NINQ8N4C6 2090 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 N4BP2L2Q92802 583 aaPredicted RBP10.44□□□□□ -0.74
CUX1-203ENST00000360264 ZBTB18Q99592 522 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 ATP6V0A4Q9HBG4 840 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 USP19O94966 1318 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 FRMPD2Q68DX3 1309 aaPredicted RBP10.44□□□□□ -0.74
CUX1-203ENST00000360264 CITO14578 2027 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 ATP10BO94823 1461 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 U2AF2P26368 475 aaKnown RBP eCLIP10.44□□□□□ -0.741e-7■■■■■ 27.9
CUX1-203ENST00000360264 PPWD1Q96BP3 646 aaKnown RBP10.44□□□□□ -0.74
CUX1-203ENST00000360264 SERPINI1Q99574 410 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 SLC39A2Q9NP94 309 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 TAC1P20366 129 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 NNMTP40261 264 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 KRT80Q6KB66 452 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 FAM96AQ9H5X1 160 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 PPP2R2CQ9Y2T4 447 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 TCP10L2B9ZVM9 353 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 EFCAB14O75071 495 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 SNX1Q13596 522 aa10.44□□□□□ -0.74
CUX1-203ENST00000360264 RPAP1Q9BWH6 1393 aaPredicted RBP10.44□□□□□ -0.74
CUX1-203ENST00000360264 PFKFB2O60825 505 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms