RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 B4E1Z4 1266 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 E7EWF7 191 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 ORC4O43929 436 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 FOSP01100 380 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-205ENST00000360047 MMEP08473 750 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 PTPRAP18433 802 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 RASA1P20936 1047 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 IBSPP21815 317 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-205ENST00000360047 SCNN1AP37088 669 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 MAGEA8P43361 318 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 ICA1Q05084 483 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 PPATQ06203 517 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 SPP2Q13103 211 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 NECTIN1Q15223 517 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 LRRC41Q15345 812 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 E2F4Q16254 413 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 CCDC183Q5T5S1 534 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 CYP4F22Q6NT55 531 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 TBC1D10CQ8IV04 446 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 SAMD14Q8IZD0 417 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-205ENST00000360047 SLC43A3Q8NBI5 491 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 GABPB2Q8TAK5 448 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-205ENST00000360047 OPTNQ96CV9 577 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 SH2D4AQ9H788 454 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 COMMD8Q9NX08 183 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-205ENST00000360047 STX8Q9UNK0 236 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
PDE4D-205ENST00000360047 TNFRSF10BO14763 440 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 TUBB4AP04350 444 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 HSPA4P34932 840 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 AMPD3Q01432 767 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 RRP1BQ14684 758 aaKnown RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 ELF2Q15723 593 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 ZYXQ15942 572 aaKnown RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 NOL9Q5SY16 702 aaKnown RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 LEKR1Q6ZMV7 388 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 CCDC84Q86UT8 332 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 MYLK4Q86YV6 388 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 ZNF280CQ8ND82 737 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 NEDD1Q8NHV4 660 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 C17orf50Q8WW18 174 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 IPCEF1Q8WWN9 437 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 NLRP7Q8WX94 980 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 GTF3C6Q969F1 213 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 TBC1D31Q96DN5 1066 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 JAKMIP1Q96N16 626 aaKnown RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 NEK1Q96PY6 1258 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 CLIP2Q9UDT6 1046 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 USTQ9Y2C2 406 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 SNCAIPQ9Y6H5 919 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 A0A087WUV0 522 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 USP17L10C9JJH3 530 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 IFIT3O14879 490 aaKnown RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 NEMFO60524 1076 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 NT5C2P49902 561 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 SNAPC2Q13487 334 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 Q3C1V9 767 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 TTC19Q6DKK2 380 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 UNC5DQ6UXZ4 953 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 GADL1Q6ZQY3 521 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 KRT77Q7Z794 578 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 SAMD3Q8N6K7 520 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 TMEM87AQ8NBN3 555 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 GLMNQ92990 594 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 WNK4Q96J92 1243 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 CAPNS2Q96L46 248 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 ZKSCAN3Q9BRR0 538 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 GPHNQ9NQX3 736 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 CLIC5Q9NZA1 410 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.53□□□□□ -1.52
PDE4D-205ENST00000360047 MYH1P12882 1939 aa5.53□□□□□ -1.52
PDE4D-205ENST00000360047 PABPN1LA6NDY0 278 aaKnown RBP5.52□□□□□ -1.53
PDE4D-205ENST00000360047 SPDYE5A6NIY4 337 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 CXCL11O14625 94 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 KINO60870 393 aaKnown RBP5.52□□□□□ -1.53
PDE4D-205ENST00000360047 TTLL1O95922 423 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 TSPAN7P41732 249 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 PIK3CAP42336 1068 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 GTF2A2P52657 109 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 USP14P54578 494 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 ADCY2Q08462 1091 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 NOGQ13253 232 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 PPIL2Q13356 520 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 COBLL1Q53SF7 1204 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 SPRYD7Q5W111 196 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 OTUD7BQ6GQQ9 843 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 BLOC1S2Q6QNY1 142 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 NFXL1Q6ZNB6 911 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 CHST3Q7LGC8 479 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 REXO1L1PQ8IX06 675 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 LSM14AQ8ND56 463 aaKnown RBP5.52□□□□□ -1.53
PDE4D-205ENST00000360047 ZFPM2Q8WW38 1151 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 SH3KBP1Q96B97 665 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 MIEF2Q96C03 454 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 FAXDC2Q96IV6 333 aa5.52□□□□□ -1.53
PDE4D-205ENST00000360047 HHIPL1Q96JK4 782 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms