RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 GGPS1O95749 300 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 BEX3Q00994 111 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NEDD9Q14511 834 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 FSCN1Q16658 493 aaKnown RBP21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CEP55Q53EZ4 464 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 TMEM63BQ5T3F8 832 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 OXER1Q8TDS5 423 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 PAWRQ96IZ0 340 aaKnown RBP21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 C11orf49Q9H6J7 331 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 JADE2Q9NQC1 790 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 DDX41Q9UJV9 622 aaKnown RBP21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 UBIAD1Q9Y5Z9 338 aa21.81■■□□□ 1.08
HLA-DRB1-201ENST00000360004 ADAMTS4O75173 837 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 RGS20O76081 388 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CUL4AQ13619 759 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 INF2Q27J81 1249 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 MCTP1Q6DN14 999 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CCDC62Q6P9F0 684 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 PLA2G4DQ86XP0 818 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 GIMAP8Q8ND71 665 aaPredicted RBP21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 DIS3LQ8TF46 1054 aaKnown RBP21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 UPF3AQ9H1J1 476 aaKnown RBP21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 TCEAL9Q9UHQ7 104 aa21.8■■□□□ 1.08
HLA-DRB1-201ENST00000360004 BTBD18B2RXH4 712 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 SPATA31C2B4DYI2 1134 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NOP56O00567 594 aaKnown RBP21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 MAFGO15525 162 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 MYL3P08590 195 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CYP3A4P08684 503 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 ITGB5P18084 799 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 UBA1P22314 1058 aaKnown RBP21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 PTGS1P23219 599 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 ICAM3P32942 547 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 SETQ01105 290 aaPredicted RBP21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NR5A1Q13285 461 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 LAMC2Q13753 1193 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NPY5RQ15761 445 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 KCNA10Q16322 511 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 FBXO18Q8NFZ0 1043 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 SENP6Q9GZR1 1112 aaPredicted RBP21.79■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CENPFP49454 3210 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 MYADML2A6NDP7 307 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 USP11P51784 963 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 SP4Q02446 784 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 LETM2Q2VYF4 491 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 PRR16Q569H4 304 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 LARP1BQ659C4 914 aaKnown RBP21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NEK8Q86SG6 692 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NAP1L4Q99733 375 aaKnown RBP21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 SDF4Q9BRK5 362 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 TSEN34Q9BSV6 310 aaKnown RBP21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 POLR3EQ9NVU0 708 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 FRMPD3Q5JV73 1810 aa21.78■■□□□ 1.08
HLA-DRB1-201ENST00000360004 MOXD2PA6NHM9 499 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 M0R2N6 131 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 MARCH6O60337 910 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 PDCP20941 246 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CST5P28325 142 aaPredicted RBP21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 ARHGAP1Q07960 439 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CELF3Q5SZQ8 465 aaKnown RBP21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CYFIP1Q7L576 1253 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 NIPA1Q7RTP0 329 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 CYP2W1Q8TAV3 490 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 AFG1LQ8WV93 481 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 INTS4Q96HW7 963 aaKnown RBP21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 GLT1D1Q96MS3 346 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 HTATIP2Q9BUP3 242 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 KCNH7Q9NS40 1196 aa21.77■■□□□ 1.08
HLA-DRB1-201ENST00000360004 KIAA1217Q5T5P2 1943 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 ASGR1P07306 291 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 ACLYP53396 1101 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 CHMP4BP1P59074 171 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 IRX5P78411 483 aaPredicted RBP21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 BECN1Q14457 450 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 KLHDC9Q8NEP7 349 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 SENP7Q9BQF6 1050 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 ZNF577Q9BSK1 485 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 PHF24Q9UPV7 400 aa21.76■■□□□ 1.07
HLA-DRB1-201ENST00000360004 VPS37CA5D8V6 355 aaPredicted RBP21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 FAM86B1E9PN63 330 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 MEIS1O00470 390 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 CCNT1O60563 726 aaKnown RBP21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 KPNA6O60684 536 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 FAM86B2P0C5J1 330 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 ARP10275 920 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 ATP2B1P20020 1258 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 SP2Q02086 613 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 SEMA3FQ13275 785 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 FOXP1Q9H334 677 aaPredicted RBP21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 STARD7Q9NQZ5 370 aa21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 NOL7Q9UMY1 257 aaKnown RBP21.75■■□□□ 1.07
HLA-DRB1-201ENST00000360004 A0A1W2PQ45 241 aaPredicted RBP21.74■■□□□ 1.07
HLA-DRB1-201ENST00000360004 A0A1W2PQY0 241 aa21.74■■□□□ 1.07
HLA-DRB1-201ENST00000360004 CABYRO75952 493 aa21.74■■□□□ 1.07
HLA-DRB1-201ENST00000360004 CIITAP33076 1130 aa21.74■■□□□ 1.07
HLA-DRB1-201ENST00000360004 ATN1P54259 1190 aaPredicted RBP21.74■■□□□ 1.07
HLA-DRB1-201ENST00000360004 DGKDQ16760 1214 aa21.74■■□□□ 1.07
HLA-DRB1-201ENST00000360004 MYSM1Q5VVJ2 828 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms