RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 TRIM11Q96F44 468 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 PBKQ96KB5 322 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 PPLO60437 1756 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 SUN1O94901 812 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 ADD2P35612 726 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 BCAMP50895 628 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 ALS2CLQ60I27 953 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 DEPTORQ8TB45 409 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 RILPQ96NA2 401 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 SH2B2O14492 632 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 GIMAP8Q8ND71 665 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-202ENST00000359526 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 DPH5Q9H2P9 285 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 SH3GLB2Q9NR46 395 aa13.31□□□□□ -0.28
DNMT1-202ENST00000359526 ZBED6P86452 979 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 CCDC197Q8NCU1 140 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 PPM1FP49593 454 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-202ENST00000359526 RASSF7Q02833 373 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 PSMD2Q13200 908 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 KCTD2Q14681 263 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 STYK1Q6J9G0 422 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 GBP7Q8N8V2 638 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-202ENST00000359526 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 CNOT10Q9H9A5 744 aaKnown RBP13.3□□□□□ -0.28
DNMT1-202ENST00000359526 M0R2C6 588 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 CYP27B1O15528 508 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
DNMT1-202ENST00000359526 LIFRP42702 1097 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 ELMSAN1Q6PJG2 1045 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 GPKOWQ92917 476 aaPredicted RBP eCLIP13.3□□□□□ -0.282e-7■■□□□ 12.3
DNMT1-202ENST00000359526 TRIM4Q9C037 500 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 K7ENM7 598 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
DNMT1-202ENST00000359526 TMOD1P28289 359 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 EHHADHQ08426 723 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 ISCA1Q9BUE6 129 aa13.3□□□□□ -0.28
DNMT1-202ENST00000359526 ZWINTO95229 277 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 CASC4Q6P4E1 433 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 RICTORQ6R327 1708 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 STAM2O75886 525 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 MFAP3P55082 362 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 IL9RQ01113 521 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 TAF12Q16514 161 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 Q9H521 79 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 TLR7Q9NYK1 1049 aaKnown RBP13.29□□□□□ -0.28
DNMT1-202ENST00000359526 GYG1P46976 350 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 IRX5P78411 483 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-202ENST00000359526 ALCAMQ13740 583 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 GPIHBP1Q8IV16 184 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
DNMT1-202ENST00000359526 RPSAP08865 295 aaKnown RBP13.29□□□□□ -0.28
DNMT1-202ENST00000359526 MAGEA9P43362 315 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 SLC12A2P55011 1212 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 WHAMMQ8TF30 809 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 WDR11Q9BZH6 1224 aa13.29□□□□□ -0.28
DNMT1-202ENST00000359526 TPX2Q9ULW0 747 aaKnown RBP13.29□□□□□ -0.28
DNMT1-202ENST00000359526 LRRD1A4D1F6 860 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 PHKA1P46020 1223 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 CTAGE3PQ8IX95 158 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 C2orf69Q8N8R5 385 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 TRIM6Q9C030 488 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 INTS9Q9NV88 658 aaKnown RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 KRT19P08727 400 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 CNGA1P29973 690 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 LIG4P49917 911 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 SLFNL1Q499Z3 407 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 FAM102BQ5T8I3 360 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 ARL6IP4Q66PJ3 421 aaKnown RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 MMS22LQ6ZRQ5 1243 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 TTC16Q8NEE8 873 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 SUDS3Q9H7L9 328 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-202ENST00000359526 MMP10P09238 476 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 CCNE1P24864 410 aa13.28□□□□□ -0.28
DNMT1-202ENST00000359526 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms