RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 PPARDQ03181 441 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 CCDC181Q5TID7 509 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 POTEBQ6S5H4 581 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 MTMR8Q96EF0 704 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.65■■□□□ 1.22
COL13A1-202ENST00000357811 PCDHAC2Q9Y5I4 1007 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 AHDC1Q5TGY3 1603 aaPredicted RBP22.64■■□□□ 1.22
COL13A1-202ENST00000357811 NAV1Q8NEY1 1877 aa22.64■■□□□ 1.22
COL13A1-202ENST00000357811 DDX60LQ5H9U9 1706 aaKnown RBP22.64■■□□□ 1.22
COL13A1-202ENST00000357811 ATP2B4P23634 1241 aa22.64■■□□□ 1.22
COL13A1-202ENST00000357811 DNAJC21Q5F1R6 531 aaKnown RBP22.64■■□□□ 1.22
COL13A1-202ENST00000357811 SND1Q7KZF4 910 aaKnown RBP eCLIP22.64■■□□□ 1.22
COL13A1-202ENST00000357811 RAB34Q9BZG1 259 aa22.64■■□□□ 1.22
COL13A1-202ENST00000357811 PANK4Q9NVE7 773 aa22.64■■□□□ 1.22
COL13A1-202ENST00000357811 MEIS1O00470 390 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 IL1R1P14778 569 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 FXR2P51116 673 aaKnown RBP eCLIP22.64■■□□□ 1.21
COL13A1-202ENST00000357811 TUBB4BP68371 445 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 KCNMA1Q12791 1236 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 C10orf67Q8IYJ2 551 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 MYOCDQ8IZQ8 938 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 GUF1Q8N442 669 aaKnown RBP22.64■■□□□ 1.21
COL13A1-202ENST00000357811 FAM71BQ8TC56 605 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 USP40Q9NVE5 1235 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 STK17AQ9UEE5 414 aa22.64■■□□□ 1.21
COL13A1-202ENST00000357811 NFIAQ12857 509 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 ZFPM1Q8IX07 1006 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 CERS5Q8N5B7 392 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 TRIM58Q8NG06 486 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 PSTPIP2Q9H939 334 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 JRKLQ9Y4A0 524 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 HERC4Q5GLZ8 1057 aaPredicted RBP22.63■■□□□ 1.21
COL13A1-202ENST00000357811 CCNI2Q6ZMN8 369 aaPredicted RBP22.63■■□□□ 1.21
COL13A1-202ENST00000357811 BAP1Q92560 729 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 OSBPL9Q96SU4 736 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 USP21Q9UK80 565 aa22.63■■□□□ 1.21
COL13A1-202ENST00000357811 FTCDO95954 541 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 VPS72Q15906 364 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 FAM26FQ5R3K3 315 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 TTC19Q6DKK2 380 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-202ENST00000357811 PURBQ96QR8 312 aaKnown RBP22.62■■□□□ 1.21
COL13A1-202ENST00000357811 TSG101Q99816 390 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 LSM14BQ9BX40 385 aaKnown RBP22.62■■□□□ 1.21
COL13A1-202ENST00000357811 SERPINB13Q9UIV8 391 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 KRT18P05783 430 aaKnown RBP22.62■■□□□ 1.21
COL13A1-202ENST00000357811 ZNF543Q08ER8 600 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 CERS3Q8IU89 383 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 SPATA4Q8NEY3 305 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 ACBD3Q9H3P7 528 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 BCAS3Q9H6U6 928 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 RSPH14Q9UHP6 348 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 PVALEFA0A1B0GWK0 134 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 A0A1W2PQJ5 194 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 ESYT3A0FGR9 886 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 MAP9Q49MG5 647 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 SLC30A10Q6XR72 485 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 GOLGA5Q8TBA6 731 aa22.62■■□□□ 1.21
COL13A1-202ENST00000357811 TTLL1O95922 423 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 GYS1P13807 737 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 RAPGEF1Q13905 1077 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 CCDC84Q86UT8 332 aaPredicted RBP22.61■■□□□ 1.21
COL13A1-202ENST00000357811 GOLGA6L1Q8N7Z2 621 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 DNAJC19Q96DA6 116 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 RBM17Q96I25 401 aaKnown RBP22.61■■□□□ 1.21
COL13A1-202ENST00000357811 GOLPH3Q9H4A6 298 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 SBF2Q86WG5 1849 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 MAST2Q6P0Q8 1798 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 PNMA6FA0A0J9YX94 578 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 ZSCAN5CA6NGD5 496 aaPredicted RBP22.61■■□□□ 1.21
COL13A1-202ENST00000357811 ASPRV1Q53RT3 343 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 KCNQ5Q9NR82 932 aa22.61■■□□□ 1.21
COL13A1-202ENST00000357811 ANO9A1A5B4 782 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 POTEFA5A3E0 1075 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 POTEIP0CG38 1075 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 FIGNQ5HY92 759 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 POTEGQ6S5H5 508 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 POTEEQ6S8J3 1075 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 GPBP1Q86WP2 473 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 CUL5Q93034 780 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 TSGA10Q9BZW7 698 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 UTRNP46939 3433 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 ESYT2A0FGR8 921 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 TLR2O60603 784 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 PACSIN1Q9BY11 444 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 COL4A3BPQ9Y5P4 624 aa22.6■■□□□ 1.21
COL13A1-202ENST00000357811 ACTN1P12814 892 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 PDXDC1Q6P996 788 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 FAM133AQ8N9E0 248 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 TBC1D5Q92609 795 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 ALS2CR12Q96Q35 445 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 RBM12Q9NTZ6 932 aaKnown RBP22.59■■□□□ 1.21
COL13A1-202ENST00000357811 ADAMTS1Q9UHI8 967 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 LRRC63Q05C16 580 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 USH1GQ495M9 461 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 FAM83BQ5T0W9 1011 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 RIC8AQ9NPQ8 531 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 AGPSO00116 658 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 TUBBP07437 444 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 PPP1R2P41236 205 aa22.59■■□□□ 1.21
COL13A1-202ENST00000357811 FKBP3Q00688 224 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms