RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 TSG101Q99816 390 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 SH3GLB2Q9NR46 395 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 ADAMTS1Q9UHI8 967 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 GGA2Q9UJY4 613 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 A0A0G2JS52 829 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 PRPHP41219 470 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 FAM83BQ5T0W9 1011 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 SUSD4Q5VX71 490 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 C6orf89Q6UWU4 347 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 FUKQ8N0W3 1084 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 USP38Q8NB14 1042 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 PLCB1Q9NQ66 1216 aa8.45□□□□□ -1.06
CD46-204ENST00000357714 NOVA2Q9UNW9 492 aaKnown RBP8.45□□□□□ -1.06
CD46-204ENST00000357714 FRMD3A2A2Y4 597 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 ORC4O43929 436 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 SERPING1P05155 500 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 TXKP42681 527 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 ERVK-9P63128 1117 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 TFAP4Q01664 338 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 SATB1Q01826 763 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 KLHL30Q0D2K2 578 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 NAB2Q15742 525 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 KCTD19Q17RG1 926 aaPredicted RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 ASTE1Q2TB18 679 aaPredicted RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 CAVIN4Q5BKX8 364 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 GKAP1Q5VSY0 366 aaPredicted RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 HGSNATQ68CP4 663 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 CCDC50Q8IVM0 306 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 SGSM3Q96HU1 749 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 SEC16BQ96JE7 1060 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 INPP4AQ96PE3 977 aaPredicted RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 LSM14BQ9BX40 385 aaKnown RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 OSBPL7Q9BZF2 842 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 CRNKL1Q9BZJ0 848 aaKnown RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 ISCUQ9H1K1 167 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 MCM8Q9UJA3 840 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.44□□□□□ -1.06
CD46-204ENST00000357714 TNS2Q63HR2 1409 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 FLT1P17948 1338 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 CCDC189A1A4V9 331 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 TMCO5BA8MYB1 307 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 DNM1LO00429 736 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 TRAF5O00463 557 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 TRAPPC3O43617 180 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 CLSTN1O94985 981 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 FGRP09769 529 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 GNAQP50148 359 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 NAPAP54920 295 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 PPP2R2AP63151 447 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 IFFO1Q0D2I5 559 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 SF3A3Q12874 501 aaKnown RBP eCLIP8.44□□□□□ -1.061e-6■■■■□ 20.9
CD46-204ENST00000357714 QPCTQ16769 361 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 KRT71Q3SY84 523 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 MEI1Q5TIA1 1274 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 MSL1Q68DK7 614 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 LRIG3Q6UXM1 1119 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 C1orf131Q8NDD1 294 aaKnown RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 AP1M1Q9BXS5 423 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 MCM9Q9NXL9 1143 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 STX8Q9UNK0 236 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 CHD4Q14839 1912 aa8.44□□□□□ -1.06
CD46-204ENST00000357714 PARP4Q9UKK3 1724 aaKnown RBP8.44□□□□□ -1.06
CD46-204ENST00000357714 SRRM3A6NNA2 597 aaPredicted RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 C21orf2O43822 256 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 CYP19A1P11511 503 aaPredicted RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 EPS15P42566 896 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 CLNS1AP54105 237 aaKnown RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 ZNF844Q08AG5 666 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 BIRC3Q13489 604 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 CUL1Q13616 776 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 NONOQ15233 471 aaKnown RBP eCLIP8.43□□□□□ -1.06
CD46-204ENST00000357714 SPRED3Q2MJR0 410 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 ANKRD20A8PQ5CZ79 823 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 UNC13DQ70J99 1090 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 KIRREL3Q8IZU9 778 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 PACSIN1Q9BY11 444 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 NUCKS1Q9H1E3 243 aaKnown RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 GOLPH3Q9H4A6 298 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 KANSL2Q9H9L4 492 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 DCP1AQ9NPI6 582 aaPredicted RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 FBXL5Q9UKA1 691 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 TPX2Q9ULW0 747 aaKnown RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 LEMD3Q9Y2U8 911 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 ATP6V0A2Q9Y487 856 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 A0A087X0T9 212 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 MYMKA6NI61 221 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 PHF20L1A8MW92 1017 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 FAM228BP0C875 321 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 GOLGA8HP0CJ92 632 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 MAGOHP61326 146 aaKnown RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 LRRC63Q05C16 580 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 GALNT17Q6IS24 598 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 RCSD1Q6JBY9 416 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 TMED8Q6PL24 325 aaPredicted RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 ZNF34Q8IZ26 560 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 GUF1Q8N442 669 aaKnown RBP8.43□□□□□ -1.06
CD46-204ENST00000357714 FAM133AQ8N9E0 248 aa8.43□□□□□ -1.06
CD46-204ENST00000357714 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms