RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 DNAAF3Q8N9W5 541 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 ZNF653Q96CK0 615 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 EIF3CQ99613 913 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 OSBPL1AQ9BXW6 950 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 ZNF229Q9UJW7 825 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 TLK1Q9UKI8 766 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 WDR62O43379 1518 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 SYCP2Q9BX26 1530 aa11.93□□□□□ -0.5
GTF3C1-201ENST00000356183 CARSP49589 748 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 HACD3Q9P035 362 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 KIF17Q9P2E2 1029 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ZMYM6O95789 1325 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 STAT2P52630 851 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ALS2CLQ60I27 953 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 NSMFQ6X4W1 530 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ING2Q9H160 280 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ACSL3O95573 720 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 OCRLQ01968 901 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 XKR9Q5GH70 373 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 C1orf146Q5VVC0 180 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 NUGGCQ68CJ6 796 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 MCF2LO15068 1137 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 PDE6AP16499 860 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 NOC2LQ9Y3T9 749 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 RASGRF2O14827 1237 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 DMP1Q13316 513 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 C11orf57Q6ZUT1 292 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 EYA3Q99504 573 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 TUBGCP2Q9BSJ2 902 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 NHEJ1Q9H9Q4 299 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 RFX1P22670 979 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 MRPS15P82914 257 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 TFAP4Q01664 338 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 ZFP69BQ9UJL9 534 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
GTF3C1-201ENST00000356183 RIMS2Q9UQ26 1411 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PNMA6EA0A0J9YXQ4 647 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 DCTN3O75935 186 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 MFAP3P55082 362 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PPARAQ07869 468 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 CATSPER3Q86XQ3 398 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 GIPC2Q8TF65 315 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 NFU1Q9UMS0 254 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PCDHA13Q9Y5I0 950 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 E9PMD0 336 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 KIF1CO43896 1103 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 LRRN2O75325 713 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 E2F6O75461 281 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 CHGBP05060 677 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 MMEP08473 750 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 GFAPP14136 432 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 MRPL28Q13084 256 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 C6orf118Q5T5N4 469 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 NLRX1Q86UT6 975 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 HSPA8P11142 646 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 CMA1P23946 247 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 KRT27Q7Z3Y8 459 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 CRLF3Q8IUI8 442 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 FAM178BQ8IXR5 827 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 CCHCR1Q8TD31 782 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 GLG1Q92896 1179 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 EYA2O00167 538 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 SOX5P35711 763 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 DR1Q01658 176 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 UBE3AQ05086 875 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 FAM47EQ6ZV65 393 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PCGF5Q86SE9 256 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 GSPT2Q8IYD1 628 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 ZNF654Q8IZM8 581 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 TTC17Q96AE7 1141 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 SATB2Q9UPW6 733 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 SNX5Q9Y5X3 404 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PLCH2O75038 1416 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PTH1RQ03431 593 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 PARP9Q8IXQ6 854 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 NEUROG2Q9H2A3 272 aa11.91□□□□□ -0.5
GTF3C1-201ENST00000356183 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-201ENST00000356183 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
GTF3C1-201ENST00000356183 NSUN2Q08J23 767 aaKnown RBP eCLIP11.9□□□□□ -0.5
GTF3C1-201ENST00000356183 PDCLQ13371 301 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms