RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TMEM221A6NGB7 291 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 CTNNA1P35221 906 aaKnown RBP17.24■□□□□ 0.35
RTN3-205ENST00000356000 GRIN1Q05586 938 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 PLS1Q14651 629 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 HDGFL1Q5TGJ6 251 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 ASRGL1Q7L266 308 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 LZICQ8WZA0 190 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 FAM136AQ96C01 138 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 LRRC45Q96CN5 670 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 NKX1-2Q9UD57 310 aaPredicted RBP17.24■□□□□ 0.35
RTN3-205ENST00000356000 TSKSQ9UJT2 592 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 ZMYND8Q9ULU4 1186 aaPredicted RBP17.24■□□□□ 0.35
RTN3-205ENST00000356000 STK38LQ9Y2H1 464 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 BZW2Q9Y6E2 419 aaKnown RBP17.24■□□□□ 0.35
RTN3-205ENST00000356000 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
RTN3-205ENST00000356000 DCDC2CA8MYV0 355 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 ZNF189O75820 626 aaPredicted RBP17.24■□□□□ 0.35
RTN3-205ENST00000356000 CALB2P22676 271 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 C17orf50Q8WW18 174 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 DYDC1Q8WWB3 177 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 SLC35B4Q969S0 331 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 PBKQ96KB5 322 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 VCX3BQ9H321 246 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 VCX3AQ9NNX9 186 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 ATP8A2Q9NTI2 1148 aa17.24■□□□□ 0.35
RTN3-205ENST00000356000 GOLGA8BA8MQT2 603 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 MBD4O95243 580 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 FAM200BP0CF97 657 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 DPYDQ12882 1025 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 TRADDQ15628 312 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
RTN3-205ENST00000356000 NCSTNQ92542 709 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 AIFM3Q96NN9 605 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 PSMB7Q99436 277 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 KRT23Q9C075 422 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 FAM192AQ9GZU8 254 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 RNPEPL1Q9HAU8 725 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 A0A0G2JLW4 131 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 KLF18A0A0U1RQI7 1052 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 A0A1W2PQC6 194 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
RTN3-205ENST00000356000 KCNJ18B7U540 433 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
RTN3-205ENST00000356000 LGR5O75473 907 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 GSTT1P30711 240 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 KCNJ12Q14500 433 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 SMYD4Q8IYR2 804 aaPredicted RBP17.23■□□□□ 0.35
RTN3-205ENST00000356000 KIF2BQ8N4N8 673 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 MDM1Q8TC05 714 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 ELAC2Q9BQ52 826 aaKnown RBP17.23■□□□□ 0.35
RTN3-205ENST00000356000 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 WDR37Q9Y2I8 494 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 SLC4A7Q9Y6M7 1214 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 USP6P35125 1406 aa17.23■□□□□ 0.35
RTN3-205ENST00000356000 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 EVA1CP58658 441 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 LMNB2Q03252 620 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 LRRC34Q8IZ02 419 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 TLCD1Q96CP7 247 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 GSDMAQ96QA5 445 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
RTN3-205ENST00000356000 LRRC37A3O60309 1634 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 GJA8P48165 433 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
RTN3-205ENST00000356000 RAD23BP54727 409 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 BPIFB4P59827 614 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 TSNAXIP1Q2TAA8 658 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 PTPRN2Q92932 1015 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 CAMKK2Q96RR4 588 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 MTRQ99707 1265 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 ISCUQ9H1K1 167 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 MLXIPQ9HAP2 919 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 SCOCQ9UIL1 159 aa17.22■□□□□ 0.35
RTN3-205ENST00000356000 MYH10P35580 1976 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 MOCS3O95396 460 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 CCDC166P0CW27 439 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 MYBP10242 640 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 SH3RF1Q7Z6J0 888 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 SMYD1Q8NB12 490 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 ATXN2LQ8WWM7 1075 aaKnown RBP17.21■□□□□ 0.35
RTN3-205ENST00000356000 AGAP3Q96P47 875 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 ZNF263O14978 683 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 TMCC1O94876 653 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 ECHS1P30084 290 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
RTN3-205ENST00000356000 TIPINQ9BVW5 301 aa17.21■□□□□ 0.35
RTN3-205ENST00000356000 TLR10Q9BXR5 811 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms