RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ZSCAN20P17040 1043 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 DPCR1Q3MIW9 517 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 ZNF772Q68DY9 489 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 TTC19Q6DKK2 380 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 PIH1D3Q9NQM4 214 aaKnown RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 BCAP29Q9UHQ4 241 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 PDE1BQ01064 536 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 CCDC38Q502W7 563 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 SLC35F6Q8N357 371 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 ZSWIM5Q9P217 1185 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 RNF123Q5XPI4 1314 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 EFCAB8A8MWE9 144 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 BAG2O95816 211 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 ACTN1P12814 892 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 CDC37Q16543 378 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 FAM133AQ8N9E0 248 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 PIGBQ92521 554 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 DHX36Q9H2U1 1008 aaKnown RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 POLR3EQ9NVU0 708 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 GFPT2O94808 682 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 DDIT3P35638 169 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 ZNF658Q5TYW1 1059 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 UBE2TQ9NPD8 197 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-202ENST00000355133 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
SCN8A-202ENST00000355133 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 MARK3P27448 753 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 GABPB1Q06547 395 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 ADCY1Q08828 1119 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 SUSD4Q5VX71 490 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 CACTINQ8WUQ7 758 aaKnown RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 CD58P19256 250 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 ARHGAP4P98171 946 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 C11orf57Q6ZUT1 292 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 SMAP1Q8IYB5 467 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 NPHP4O75161 1426 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 INHBAP08476 426 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 PPP1R13BQ96KQ4 1090 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 S100BP04271 92 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 PTPN12Q05209 780 aaKnown RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 DALRD3Q5D0E6 543 aaKnown RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 CAPS2Q9BXY5 557 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 TMEM206Q9H813 350 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 PLEKHG1Q9ULL1 1385 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 KRT1P04264 644 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 KRT3P12035 628 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 GRAPQ13588 217 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 KCTD16Q68DU8 428 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 KIAA1841Q6NSI8 718 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 GBP7Q8N8V2 638 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 GRAPLQ8TC17 118 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-202ENST00000355133 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 GCNT4Q9P109 453 aa14.35□□□□□ -0.11
SCN8A-202ENST00000355133 CDK8P49336 464 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 RASGRF1Q13972 1273 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 CTTNQ14247 550 aaKnown RBP14.34□□□□□ -0.11
SCN8A-202ENST00000355133 MAN2A1Q16706 1144 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 SCARA5Q6ZMJ2 495 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
SCN8A-202ENST00000355133 BBS5Q8N3I7 341 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 FNDC3AQ9Y2H6 1198 aaKnown RBP14.34□□□□□ -0.11
SCN8A-202ENST00000355133 SRGAP2CP0DJJ0 459 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 PYCARDQ9ULZ3 195 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 HEG1Q9ULI3 1381 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 GOLGA8CPA6NN73 597 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 ARHGEF6Q15052 776 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 EXOC8Q8IYI6 725 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 TRIM11Q96F44 468 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 CHMP6Q96FZ7 201 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 hCG_1984214I3L0E3 225 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 PSAPP07602 524 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 PLA2G4BP0C869 781 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 CASP2P42575 452 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 MMEL1Q495T6 779 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 CIAPIN1Q6FI81 312 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 ZNF713Q8N859 430 aaPredicted RBP14.34□□□□□ -0.11
SCN8A-202ENST00000355133 CDHR1Q96JP9 859 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 PCDHB6Q9Y5E3 794 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
SCN8A-202ENST00000355133 SAMD9Q5K651 1589 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 GOLGA8IPA6NC78 632 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 GOLGA8JA6NMD2 632 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 MUM1Q2TAK8 710 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 OR6B2Q6IFH4 312 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 PARD3BQ8TEW8 1205 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 CAPN7Q9Y6W3 813 aa14.33□□□□□ -0.11
SCN8A-202ENST00000355133 PRPF3O43395 683 aaKnown RBP14.33□□□□□ -0.12
SCN8A-202ENST00000355133 PLCG1P19174 1290 aa14.33□□□□□ -0.12
SCN8A-202ENST00000355133 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
SCN8A-202ENST00000355133 ABT1Q9ULW3 272 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms