RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 NKX3-2P78367 333 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 GSTO1P78417 241 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 PPP2R5BQ15173 497 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 SBK1Q52WX2 424 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 CXCL17Q6UXB2 119 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 FBXO18Q8NFZ0 1043 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 ESR2Q92731 530 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 NKD2Q969F2 451 aaPredicted RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 SPATA32Q96LK8 384 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 ZNF396Q96N95 335 aaPredicted RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 PANK2Q9BZ23 570 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 CRNKL1Q9BZJ0 848 aaKnown RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 TSPY26PQ9H489 355 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 MROH8Q9H579 483 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 DDX19AQ9NUU7 478 aaKnown RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 SLC5A4Q9NY91 659 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 DLL3Q9NYJ7 618 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 ORC3Q9UBD5 711 aaPredicted RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 PI4KBQ9UBF8 816 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 ARPP21Q9UBL0 812 aaPredicted RBP9.45□□□□□ -0.9
CD44-205ENST00000352818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
CD44-205ENST00000352818 ASTN1O14525 1302 aa9.45□□□□□ -0.9
CD44-205ENST00000352818 ZZEF1O43149 2961 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 GOLGA8AA7E2F4 631 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 MBTPS2O43462 519 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 ORC4O43929 436 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 PFKMP08237 780 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 BEX3Q00994 111 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 CCDC173Q0VFZ6 552 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 WTAPQ15007 396 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 CLUL1Q15846 466 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 NTRK3Q16288 839 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 TCEAL5Q5H9L2 206 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 KIAA1755Q5JYT7 1200 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 NCAPG2Q86XI2 1143 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 DZIP1Q86YF9 867 aaKnown RBP9.44□□□□□ -0.9
CD44-205ENST00000352818 PCSK9Q8NBP7 692 aaKnown RBP9.44□□□□□ -0.9
CD44-205ENST00000352818 C8orf76Q96K31 380 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 ZSWIM5Q9P217 1185 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 RCOR1Q9UKL0 485 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 FAM184BQ9ULE4 1060 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 NAP1L2Q9ULW6 460 aaPredicted RBP9.44□□□□□ -0.9
CD44-205ENST00000352818 MYO7AQ13402 2215 aa9.44□□□□□ -0.9
CD44-205ENST00000352818 OTOGLQ3ZCN5 2332 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 ERICH2A1L162 156 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 CCDC69A6NI79 296 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 KIF28PB7ZC32 967 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 DTNBO60941 627 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 LDHCP07864 332 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 CYP2C9P11712 490 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 FCER1AP12319 257 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 IFNAR1P17181 557 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 PPP4CP60510 307 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 DYNLL1P63167 89 aaKnown RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 DEFB103AP81534 67 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 SIGLEC14Q08ET2 396 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 ITGA7Q13683 1181 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 PUM1Q14671 1186 aaKnown RBP eCLIP9.43□□□□□ -0.9
CD44-205ENST00000352818 GPNMBQ14956 572 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 SEC23AQ15436 765 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 TCTN1Q2MV58 587 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 CTR9Q6PD62 1173 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 NFXL1Q6ZNB6 911 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 RBM43Q6ZSC3 357 aaKnown RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 SH3RF3Q8TEJ3 882 aaPredicted RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 SDR42E1Q8WUS8 393 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 WASF1Q92558 559 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 MRPL38Q96DV4 380 aaKnown RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 TGS1Q96RS0 853 aaKnown RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 C17orf80Q9BSJ5 609 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 FUCA2Q9BTY2 467 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 DCP1AQ9NPI6 582 aaPredicted RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 RTEL1Q9NZ71 1219 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 FAM50BQ9Y247 325 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 DIS3Q9Y2L1 958 aaKnown RBP9.43□□□□□ -0.9
CD44-205ENST00000352818 SLC12A7Q9Y666 1083 aa9.43□□□□□ -0.9
CD44-205ENST00000352818 TNKSO95271 1327 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 LOC730098B7Z3J9 87 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 YEATS4O95619 227 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 SLC3A2P08195 630 aaKnown RBP9.42□□□□□ -0.9
CD44-205ENST00000352818 ARP10275 920 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 CDC27P30260 824 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 GUCY1A2P33402 732 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 PSMC6P62333 389 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 COG2Q14746 738 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 TMEM132BQ14DG7 1078 aa9.42□□□□□ -0.9
CD44-205ENST00000352818 UVSSAQ2YD98 709 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms