RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PARP2Q9UGN5 583 aa15.05■□□□□ 0
SMC6-201ENST00000351948 DAPK3O43293 454 aa15.05■□□□□ -0
SMC6-201ENST00000351948 PTPREP23469 700 aa15.05■□□□□ -0
SMC6-201ENST00000351948 FAM186BQ8IYM0 893 aa15.05■□□□□ -0
SMC6-201ENST00000351948 GOLGA5Q8TBA6 731 aa15.05■□□□□ -0
SMC6-201ENST00000351948 PARVGQ9HBI0 331 aa15.05■□□□□ -0
SMC6-201ENST00000351948 SH3GLB2Q9NR46 395 aa15.05■□□□□ -0
SMC6-201ENST00000351948 STK17AQ9UEE5 414 aa15.05■□□□□ -0
SMC6-201ENST00000351948 MYO5BQ9ULV0 1848 aa15.05■□□□□ -0
SMC6-201ENST00000351948 A0A1W2PRG0 241 aa15.05■□□□□ -0
SMC6-201ENST00000351948 PSAPP07602 524 aa15.05■□□□□ -0
SMC6-201ENST00000351948 TFAMQ00059 246 aaKnown RBP15.05■□□□□ -0
SMC6-201ENST00000351948 HHIPL2Q6UWX4 724 aa15.05■□□□□ -0
SMC6-201ENST00000351948 POTEFA5A3E0 1075 aa15.04■□□□□ -0
SMC6-201ENST00000351948 POTEIP0CG38 1075 aa15.04■□□□□ -0
SMC6-201ENST00000351948 RASSF7Q02833 373 aa15.04■□□□□ -0
SMC6-201ENST00000351948 ZNF658Q5TYW1 1059 aaPredicted RBP15.04■□□□□ -0
SMC6-201ENST00000351948 POTEGQ6S5H5 508 aa15.04■□□□□ -0
SMC6-201ENST00000351948 POTEEQ6S8J3 1075 aa15.04■□□□□ -0
SMC6-201ENST00000351948 HACE1Q8IYU2 909 aa15.04■□□□□ -0
SMC6-201ENST00000351948 ZNF512BQ96KM6 892 aaPredicted RBP15.04■□□□□ -0
SMC6-201ENST00000351948 TNNC1P63316 161 aa15.04■□□□□ -0
SMC6-201ENST00000351948 AP3B2Q13367 1082 aa15.04■□□□□ -0
SMC6-201ENST00000351948 PEX26Q7Z412 305 aa15.04■□□□□ -0
SMC6-201ENST00000351948 PIK3CAP42336 1068 aa15.04■□□□□ -0
SMC6-201ENST00000351948 SLC16A10Q8TF71 515 aa15.04■□□□□ -0
SMC6-201ENST00000351948 TIGD1Q96MW7 591 aa15.04■□□□□ -0
SMC6-201ENST00000351948 NBPF3Q9H094 633 aa15.04■□□□□ -0
SMC6-201ENST00000351948 TTLL3Q9Y4R7 772 aa15.04■□□□□ -0
SMC6-201ENST00000351948 STK36Q9NRP7 1315 aa15.04■□□□□ -0
SMC6-201ENST00000351948 IQCA1LA6NCM1 817 aa15.04■□□□□ -0
SMC6-201ENST00000351948 UBE2Q2LH0YL09 131 aa15.04■□□□□ -0
SMC6-201ENST00000351948 DYNC1I1O14576 645 aa15.04■□□□□ -0
SMC6-201ENST00000351948 BMS1Q14692 1282 aaKnown RBP15.04■□□□□ -0
SMC6-201ENST00000351948 STXBP2Q15833 593 aa15.04■□□□□ -0
SMC6-201ENST00000351948 EP400NLQ6ZTU2 488 aa15.04■□□□□ -0
SMC6-201ENST00000351948 ADGRA1Q86SQ6 560 aa15.04■□□□□ -0
SMC6-201ENST00000351948 CCDC155Q8N6L0 562 aa15.04■□□□□ -0
SMC6-201ENST00000351948 DDX12PQ92771 950 aa15.04■□□□□ -0
SMC6-201ENST00000351948 HINFPQ9BQA5 517 aa15.04■□□□□ -0
SMC6-201ENST00000351948 WDR19Q8NEZ3 1342 aa15.04■□□□□ -0
SMC6-201ENST00000351948 CCDC66A2RUB6 948 aa15.03■□□□□ -0
SMC6-201ENST00000351948 TSGA10IPQ3SY00 556 aa15.03■□□□□ -0
SMC6-201ENST00000351948 MED10Q9BTT4 135 aa15.03■□□□□ -0
SMC6-201ENST00000351948 MAGEF1Q9HAY2 307 aa15.03■□□□□ -0
SMC6-201ENST00000351948 NFX1Q12986 1120 aaKnown RBP15.03■□□□□ -0
SMC6-201ENST00000351948 CALCOCO2Q13137 446 aa15.03■□□□□ -0
SMC6-201ENST00000351948 ARL6IP4Q66PJ3 421 aaKnown RBP15.03■□□□□ -0
SMC6-201ENST00000351948 TMED8Q6PL24 325 aaPredicted RBP15.03■□□□□ -0
SMC6-201ENST00000351948 ADAT2Q7Z6V5 191 aaKnown RBP15.03■□□□□ -0
SMC6-201ENST00000351948 RETREG2Q8NC44 543 aa15.03■□□□□ -0
SMC6-201ENST00000351948 DYDC2Q96IM9 177 aa15.03■□□□□ -0
SMC6-201ENST00000351948 METTL14Q9HCE5 456 aaKnown RBP15.03■□□□□ -0
SMC6-201ENST00000351948 FKBP3Q00688 224 aaKnown RBP15.03■□□□□ -0
SMC6-201ENST00000351948 MYL7Q01449 175 aa15.03■□□□□ -0
SMC6-201ENST00000351948 TFDP1Q14186 410 aa15.03■□□□□ -0
SMC6-201ENST00000351948 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
SMC6-201ENST00000351948 NSUN6Q8TEA1 469 aaKnown RBP15.03■□□□□ -0
SMC6-201ENST00000351948 GPR75-ASB3A0A0A6YYF3 556 aa15.03■□□□□ -0
SMC6-201ENST00000351948 SHTN1A0MZ66 631 aa15.03■□□□□ -0
SMC6-201ENST00000351948 PALM3A6NDB9 673 aaPredicted RBP15.03■□□□□ -0
SMC6-201ENST00000351948 FOXN1O15353 648 aa15.03■□□□□ -0
SMC6-201ENST00000351948 VAV2P52735 878 aa15.03■□□□□ -0
SMC6-201ENST00000351948 DDR1Q08345 913 aa15.03■□□□□ -0
SMC6-201ENST00000351948 ZNF543Q08ER8 600 aa15.03■□□□□ -0
SMC6-201ENST00000351948 LLGL1Q15334 1064 aa15.03■□□□□ -0
SMC6-201ENST00000351948 CCDC91Q7Z6B0 441 aa15.03■□□□□ -0
SMC6-201ENST00000351948 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
SMC6-201ENST00000351948 TRIM49BA6NDI0 452 aa15.02■□□□□ -0
SMC6-201ENST00000351948 PPP2R5AQ15172 486 aa15.02■□□□□ -0
SMC6-201ENST00000351948 COX16Q9P0S2 106 aa15.02■□□□□ -0
SMC6-201ENST00000351948 NXF1Q9UBU9 619 aaKnown RBP15.02■□□□□ -0
SMC6-201ENST00000351948 HACL1Q9UJ83 578 aa15.02■□□□□ -0
SMC6-201ENST00000351948 NUB1Q9Y5A7 615 aa15.02■□□□□ -0
SMC6-201ENST00000351948 KIF20BQ96Q89 1820 aa15.02■□□□□ -0
SMC6-201ENST00000351948 H0YCG3 227 aa15.02■□□□□ -0
SMC6-201ENST00000351948 RIOK3O14730 519 aaKnown RBP15.02■□□□□ -0
SMC6-201ENST00000351948 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -0
SMC6-201ENST00000351948 ARL1P40616 181 aaPredicted RBP15.02■□□□□ -0
SMC6-201ENST00000351948 RESP18Q5W5W9 173 aa15.02■□□□□ -0
SMC6-201ENST00000351948 SCYL2Q6P3W7 929 aa15.02■□□□□ -0
SMC6-201ENST00000351948 ZKSCAN4Q969J2 545 aaPredicted RBP15.02■□□□□ -0
SMC6-201ENST00000351948 PPP1R14CQ8TAE6 165 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 ACCSQ96QU6 501 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 POLRMTO00411 1230 aaKnown RBP15.02□□□□□ -0.01
SMC6-201ENST00000351948 P4HA1P13674 534 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 ERCC5P28715 1186 aaPredicted RBP15.02□□□□□ -0.01
SMC6-201ENST00000351948 IRX5P78411 483 aaPredicted RBP15.02□□□□□ -0.01
SMC6-201ENST00000351948 SBK1Q52WX2 424 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 C16orf86Q6ZW13 317 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 FAM151AQ8WW52 585 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 GDAP1L1Q96MZ0 367 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 LRRC4BQ9NT99 713 aa15.02□□□□□ -0.01
SMC6-201ENST00000351948 ATP2A1O14983 1001 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 C8orf74Q6P047 294 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 DAAM2Q86T65 1068 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 UBL4BQ8N7F7 174 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 DHTKD1Q96HY7 919 aaPredicted RBP15.01□□□□□ -0.01
SMC6-201ENST00000351948 KCNQ5Q9NR82 932 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms