RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 SLFN12Q8IYM2 578 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 NEK11Q8NG66 645 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 HPS3Q969F9 1004 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 EXOC4Q96A65 974 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 MBOAT7Q96N66 472 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 LACRTQ9GZZ8 138 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 MMRN2Q9H8L6 949 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 PANK4Q9NVE7 773 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 PCDHA13Q9Y5I0 950 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 G3V3G9 751 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 HDLBPQ00341 1268 aaKnown RBP17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 COASYQ13057 564 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 UBE2SQ16763 222 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 FAM26FQ5R3K3 315 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 CCDC70Q6NSX1 233 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 NLGN1Q8N2Q7 840 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 NOA1Q8NC60 698 aaKnown RBP17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 NUDT12Q9BQG2 462 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 IFIH1Q9BYX4 1025 aaKnown RBP17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 DEF6Q9H4E7 631 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.34
TNFSF13-202ENST00000349228 USP17L10C9JJH3 530 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 MPHOSPH10O00566 681 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 TTBK2Q6IQ55 1244 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 EEF2KMTQ96G04 330 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 ZDHHC15Q96MV8 337 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 LUC7LQ9NQ29 371 aaKnown RBP17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 ARHGAP20Q9P2F6 1191 aa17.14■□□□□ 0.33
TNFSF13-202ENST00000349228 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 RCCD1A6NED2 376 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 ENC1O14682 589 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 TBX3O15119 743 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 PJA2O43164 708 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 KIF11P52732 1056 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 CASP8Q14790 479 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 ZNF572Q7Z3I7 529 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 SH2D4AQ9H788 454 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 AKR1B10O60218 316 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 PDE6BP35913 854 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 RNF10Q8N5U6 811 aaKnown RBP17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 MED4Q9NPJ6 270 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 FAM207AQ9NSI2 230 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 CEP72Q9P209 647 aa17.13■□□□□ 0.33
TNFSF13-202ENST00000349228 AFF2P51816 1311 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 HAUS3Q68CZ6 603 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 BAP1Q92560 729 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 HDAC6Q9UBN7 1215 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 SNX12Q9UMY4 172 aa17.12■□□□□ 0.33
TNFSF13-202ENST00000349228 TRAF5O00463 557 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 ZNF263O14978 683 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 PLA2G4BP0C869 781 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 TCP1P17987 556 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 CRKP46108 304 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 ATP2B2Q01814 1243 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 EDRF1Q3B7T1 1238 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 CCDC40Q4G0X9 1142 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 KCTD1Q719H9 257 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 ERMNQ8TAM6 284 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 IDI2Q9BXS1 227 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 SLC16A2P36021 539 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 SLC1A4P43007 532 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 MAGEA1P43355 309 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 ECM1Q16610 540 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 ZC3H3Q8IXZ2 948 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 MMGT1Q8N4V1 131 aa17.11■□□□□ 0.33
TNFSF13-202ENST00000349228 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms