RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 KLRF2D3W0D1 207 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 HNRNPH1P31943 449 aaKnown RBP11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MNAT1P51948 309 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CALCRLQ16602 461 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 KRT79Q5XKE5 535 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MYOCDQ8IZQ8 938 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 MTMR8Q96EF0 704 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 PBKQ96KB5 322 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 NFU1Q9UMS0 254 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 ATP6V0A2Q9Y487 856 aa11.15□□□□□ -0.62
TRAPPC6B-202ENST00000347691 SLC26A4O43511 780 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 HSPA9P38646 679 aaKnown RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SLC1A4P43007 532 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GFPT1Q06210 699 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MEI1Q5TIA1 1274 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RUFY4Q6ZNE9 571 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 LRRC55Q6ZSA7 311 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 IFT81Q8WYA0 676 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RAD54LQ92698 747 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EEF2KMTQ96G04 330 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MYMKA6NI61 221 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NCK2O43639 380 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CYTH3O43739 400 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 LDHCP07864 332 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MDH1P40925 334 aaKnown RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GRB10Q13322 594 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SLC18A3Q16572 532 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PTGISQ16647 500 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 HGSNATQ68CP4 663 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ARMC9Q7Z3E5 817 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PSMB7Q99436 277 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PLCB1Q9NQ66 1216 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CAPN7Q9Y6W3 813 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 WNK3Q9BYP7 1800 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EPHB6O15197 1021 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 BUB1O43683 1085 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PALMO75781 387 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GLI1P08151 1106 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ANXA13P27216 316 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CARSP49589 748 aaKnown RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CDR1P51861 262 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 DDR1Q08345 913 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 BIRC3Q13489 604 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TAF1DQ9H5J8 278 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ACTR5Q9H9F9 607 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 BLOC1S4Q9NUP1 217 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 BZW2Q9Y6E2 419 aaKnown RBP11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NAV1Q8NEY1 1877 aa11.14□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ZNF233A6NK53 670 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FAM107AO95990 144 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FAM83BQ5T0W9 1011 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NAA35Q5VZE5 725 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MAATS1Q7Z4T9 603 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CALR3Q96L12 384 aaKnown RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MTMR9Q96QG7 549 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ISCUQ9H1K1 167 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SAMM50Q9Y512 469 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ATAD5Q96QE3 1844 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GOLGA6L7A0A1B0GV03 622 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KRT14P02533 472 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MYZAPP0CAP1 466 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TXKP42681 527 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MARSP56192 900 aaKnown RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SIK1P57059 783 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ZNF473Q8WTR7 871 aaKnown RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RNPC3Q96LT9 517 aaKnown RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KRT12Q99456 494 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NYXQ9GZU5 481 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KDM3AQ9Y4C1 1321 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PRDX5P30044 214 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EPS15P42566 896 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ATP1A2P50993 1020 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RPS8P62241 208 aaKnown RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EHHADHQ08426 723 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RPS6KA1Q15418 735 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ASIC2Q16515 512 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KAT2BQ92831 832 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EHD4Q9H223 541 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms