RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 KRT25Q7Z3Z0 450 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 CCDC148Q8NFR7 591 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 SNX29Q8TEQ0 813 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 NDST4Q9H3R1 872 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 NLRC4Q9NPP4 1024 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 PACSIN2Q9UNF0 486 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 FAN1Q9Y2M0 1017 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 SLX4Q8IY92 1834 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 AFF2P51816 1311 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 A0A1W2PRG0 241 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 POTEFA5A3E0 1075 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 CCDC151A5D8V7 595 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 FAM86B1E9PN63 330 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 RGL2O15211 777 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 BUB1O43683 1085 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 GDF11O95390 407 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 FAM86B2P0C5J1 330 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 POTEIP0CG38 1075 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 CAPN2P17655 700 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 GNAQP50148 359 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 DNM2P50570 870 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 CASP8Q14790 479 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 POTEGQ6S5H5 508 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 POTEEQ6S8J3 1075 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 KIAA0825Q8IV33 1275 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 IPO4Q8TEX9 1081 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 JAKMIP2Q96AA8 810 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 LENG9Q96B70 501 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 ERGIC2Q96RQ1 377 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 EHD4Q9H223 541 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 PPEF1O14829 653 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 ONECUT3O60422 494 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 LRRN2O75325 713 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 EEF2P13639 858 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 SLC1A4P43007 532 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 COASYQ13057 564 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 SCFD1Q8WVM8 642 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 CRYGNQ8WXF5 182 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 LRRC1Q9BTT6 524 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 RIC8AQ9NPQ8 531 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 KIAA1024Q9UPX6 916 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 PLIN4Q96Q06 1357 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 SFI1A8K8P3 1242 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 ADCY7P51828 1080 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 ZBED6P86452 979 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 QRICH1Q2TAL8 776 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 GALNT17Q6IS24 598 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 UNC13DQ70J99 1090 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 RRAGAQ7L523 313 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 RBM17Q96I25 401 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 KCTD10Q9H3F6 313 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 MMRN2Q9H8L6 949 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 SEC63Q9UGP8 760 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 DDX25Q9UHL0 483 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 SERPINB13Q9UIV8 391 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 BCS1LQ9Y276 419 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 PCDHA13Q9Y5I0 950 aa6.72□□□□□ -1.33
CLCN3-201ENST00000347613 RBBP6Q7Z6E9 1792 aaKnown RBP6.72□□□□□ -1.33
CLCN3-201ENST00000347613 EIF3CLB5ME19 914 aaKnown RBP6.71□□□□□ -1.33
CLCN3-201ENST00000347613 ANKRD65E5RJM6 399 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 LAD1O00515 517 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 LDHCP07864 332 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 SPATA31C1P0DKV0 1188 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 HOXA13P31271 388 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-201ENST00000347613 USP14P54578 494 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 PPARDQ03181 441 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 SPAG1Q07617 926 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 SEPT2Q15019 361 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 ENOX2Q16206 610 aaKnown RBP6.71□□□□□ -1.33
CLCN3-201ENST00000347613 GJB7Q6PEY0 223 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 OLIG1Q8TAK6 271 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.33
CLCN3-201ENST00000347613 AK8Q96MA6 479 aa6.71□□□□□ -1.33
CLCN3-201ENST00000347613 EIF3CQ99613 913 aaKnown RBP6.71□□□□□ -1.33
CLCN3-201ENST00000347613 PDGFDQ9GZP0 370 aaPredicted RBP6.71□□□□□ -1.33
CLCN3-201ENST00000347613 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 EML1O00423 815 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 TTLL1O95922 423 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 GNA11P29992 359 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 KIF11P52732 1056 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 RASSF7Q02833 373 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 USH1GQ495M9 461 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CATSPER3Q86XQ3 398 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 SPICE1Q8N0Z3 855 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 PCMTD1Q96MG8 357 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-201ENST00000347613 LRRC4CQ9HCJ2 640 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 VPS18Q9P253 973 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 WRAP73Q9P2S5 460 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-201ENST00000347613 ATP6V0A2Q9Y487 856 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 SAR1BQ9Y6B6 198 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 ESYT2A0FGR8 921 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CTAGE15A4D2H0 777 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 BBOX1O75936 387 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CTAGE8P0CG41 777 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CYP11B2P19099 503 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms