RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 FKTNO75072 461 aa21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 EIF3JO75822 258 aaKnown RBP21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 RGS2P41220 211 aa21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 PRKCZQ05513 592 aa21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 SOCS4Q8WXH5 440 aa21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 KCNH7Q9NS40 1196 aa21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 PKD2L1Q9P0L9 805 aa21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 SRPRBQ9Y5M8 271 aaKnown RBP21.51■■□□□ 1.03
CHMP4A-201ENST00000347519 ASB14A6NK59 587 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 TXKP42681 527 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 ME1P48163 572 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 FLT3LGP49771 235 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 LBX1P52954 281 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 KIF22Q14807 665 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 MAMDC4Q6UXC1 1216 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 FBXO16Q8IX29 292 aaPredicted RBP21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 KATNBL1Q9H079 304 aa21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 AGO4Q9HCK5 861 aaKnown RBP21.5■■□□□ 1.03
CHMP4A-201ENST00000347519 LOC102724159A0A0B4J2E5 919 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 VWA3AA6NCI4 1184 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 LAD1O00515 517 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 ATP9AO75110 1047 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 IGHA2P01877 340 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 HSPA8P11142 646 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 PRPHP41219 470 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 MTMR1Q13613 665 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 PWP2Q15269 919 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 NFKBIBQ15653 356 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 ARL6IP4Q66PJ3 421 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 SEPT14Q6ZU15 432 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 KRI1Q8N9T8 703 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 SLC5A5Q92911 643 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 GPRASP2Q96D09 838 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 APBA2Q99767 749 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 TINF2Q9BSI4 451 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 CSRNP2Q9H175 543 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 BCAS3Q9H6U6 928 aa21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.49■■□□□ 1.03
CHMP4A-201ENST00000347519 SPATA31C2B4DYI2 1134 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 STAM2O75886 525 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SETQ01105 290 aaPredicted RBP21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 ITGB3BPQ13352 177 aaPredicted RBP21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SPECC1Q5M775 1068 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 TMEM63BQ5T3F8 832 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 NLRX1Q86UT6 975 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 PDGFCQ9NRA1 345 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SLC5A4Q9NY91 659 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 CASP8AP2Q9UKL3 1982 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 B4DLN1 442 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 TBX3O15119 743 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 DHX15O43143 795 aaKnown RBP21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 CUTAO60888 179 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 ICAM3P32942 547 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 TECP42680 631 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SP2Q02086 613 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 CSPP1Q1MSJ5 1256 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SHC4Q6S5L8 630 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 DTHD1Q6ZMT9 781 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 USP49Q70CQ1 688 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 FERMT2Q96AC1 680 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 ERO1AQ96HE7 468 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 FAM20AQ96MK3 541 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 MPHOSPH6Q99547 160 aaKnown RBP21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 ZNF577Q9BSK1 485 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 TTC12Q9H892 705 aaPredicted RBP21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SRRDQ9UH36 339 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 VAV3Q9UKW4 847 aa21.48■■□□□ 1.03
CHMP4A-201ENST00000347519 SYNGAP1Q96PV0 1343 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 PP2D1A8MPX8 630 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 IPO5O00410 1097 aaKnown RBP21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 MARCH6O60337 910 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 PSMD10O75832 226 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 ARIH2O95376 493 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 KCNA2P16389 499 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 CYP2C19P33261 490 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 PRAMEF19Q5SWL8 479 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 ADALQ6DHV7 355 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 TAPT1Q6NXT6 567 aa21.47■■□□□ 1.03
CHMP4A-201ENST00000347519 XRCC5P13010 732 aaKnown RBP21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 PTGS1P23219 599 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 FXR2P51116 673 aaKnown RBP eCLIP21.46■■□□□ 1.032e-8■■□□□ 13.1
CHMP4A-201ENST00000347519 SPIRE1Q08AE8 756 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 OLFML2BQ68BL8 750 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 SLFN12Q8IYM2 578 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 TRIB2Q92519 343 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 GOLPH3LQ9H4A5 285 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 TELO2Q9Y4R8 837 aa21.46■■□□□ 1.03
CHMP4A-201ENST00000347519 POTEMA6NI47 508 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 GOLGA6L22H0YM25 854 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 DDX39AO00148 427 aaKnown RBP21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 SORBS3O60504 671 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 CDC25AP30304 524 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 GNPTABQ3T906 1256 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 LRCH2Q5VUJ6 765 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 MSL3Q8N5Y2 521 aaKnown RBP21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 IGSF22Q8N9C0 903 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 EPSTI1Q96J88 318 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 PCDHA12Q9UN75 941 aa21.45■■□□□ 1.02
CHMP4A-201ENST00000347519 RBM47A0AV96 593 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms