RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 FKBP1BP68106 108 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 MYL5Q02045 173 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 PABPC4Q13310 644 aaKnown RBP eCLIP24.08■■□□□ 1.454e-7■■■■□ 24.1
TSPAN3-202ENST00000346495 KCNB1Q14721 858 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 NCAPH2Q6IBW4 605 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 SARM1Q6SZW1 724 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 RAD54LQ92698 747 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 LRRC27Q9C0I9 530 aa24.08■■□□□ 1.45
TSPAN3-202ENST00000346495 CHST13Q8NET6 341 aa24.07■■□□□ 1.44
TSPAN3-202ENST00000346495 CCDC47Q96A33 483 aaKnown RBP24.07■■□□□ 1.44
TSPAN3-202ENST00000346495 RMDN3Q96TC7 470 aa24.07■■□□□ 1.44
TSPAN3-202ENST00000346495 PXMP2Q9NR77 195 aa24.07■■□□□ 1.44
TSPAN3-202ENST00000346495 ERCC5P28715 1186 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 NCAPHQ15003 741 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 PGM5Q15124 567 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 ZNF658Q5TYW1 1059 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 LRCH2Q5VUJ6 765 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 ARHGEF16Q5VV41 709 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 XRRA1Q6P2D8 792 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 TRIM44Q96DX7 344 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 ZNF577Q9BSK1 485 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 TRIM9Q9C026 710 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 UBIAD1Q9Y5Z9 338 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 PSMD10O75832 226 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 EIF2AK2P19525 551 aaKnown RBP24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 SNAPC2Q13487 334 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 MOGSQ13724 837 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 MCM6Q14566 821 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 ECM1Q16610 540 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 IL31RAQ8NI17 732 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 WDR11Q9BZH6 1224 aa24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 ASCC2Q9H1I8 757 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-202ENST00000346495 ARP10275 920 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 ITGB5P18084 799 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 OSBPP22059 807 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 PPP2R5CQ13362 524 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 OTOP1Q7RTM1 612 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 RIOX2Q8IUF8 465 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 PDCD2LQ9BRP1 358 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 GTPBP4Q9BZE4 634 aaKnown RBP24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 TRIM5Q9C035 493 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 JADE2Q9NQC1 790 aa24.05■■□□□ 1.44
TSPAN3-202ENST00000346495 KLRC4O43908 158 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 GAS7O60861 476 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 RPA1P27694 616 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 GJA5P36382 358 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 HERVK_113P62684 666 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 MRPS9P82933 396 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 FMR1Q06787 632 aaKnown RBP eCLIP24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 KMT5BQ4FZB7 885 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 ENOX1Q8TC92 643 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 RIT2Q99578 217 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 TEKT3Q9BXF9 490 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 GBA2Q9HCG7 927 aaPredicted RBP24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 A1CFQ9NQ94 594 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 CYP39A1Q9NYL5 469 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 BTBD7Q9P203 1132 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 FBXO40Q9UH90 709 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 KIAA1024Q9UPX6 916 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 SRCAPQ6ZRS2 3230 aa24.04■■□□□ 1.44
TSPAN3-202ENST00000346495 POTEB3A0JP26 581 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 DCAF8L1A6NGE4 600 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 SOCS7O14512 581 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 MED24O75448 989 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 RHOBTB3O94955 611 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 ASIC1P78348 528 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 DHX8Q14562 1220 aaKnown RBP24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 CNNM4Q6P4Q7 775 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 POTEBQ6S5H4 581 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 KCNK18Q7Z418 384 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 KCTD17Q8N5Z5 321 aa24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 ZFP91Q96JP5 570 aaPredicted RBP24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 POLR3CQ9BUI4 534 aaPredicted RBP24.03■■□□□ 1.44
TSPAN3-202ENST00000346495 PPP1R3GB7ZBB8 358 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 IPO5O00410 1097 aaKnown RBP24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 CCND2P30279 289 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 ZNF75DP51815 510 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 POTEEQ6S8J3 1075 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 CATSPER3Q86XQ3 398 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 C2orf69Q8N8R5 385 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 NSUN6Q8TEA1 469 aaKnown RBP24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 SPATC1LQ9H0A9 340 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 MYCLP12524 364 aaPredicted RBP24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 GPAT2Q6NUI2 795 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 EIF2AK1Q9BQI3 630 aaKnown RBP24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 KCNH7Q9NS40 1196 aa24.02■■□□□ 1.44
TSPAN3-202ENST00000346495 MYMKA6NI61 221 aa24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 SPATA31C1P0DKV0 1188 aa24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 CD44P16070 742 aaKnown RBP24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 MTMR1Q13613 665 aa24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 SMYD4Q8IYR2 804 aaPredicted RBP24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 PURBQ96QR8 312 aaKnown RBP24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 AGO4Q9HCK5 861 aaKnown RBP24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 TUFT1Q9NNX1 390 aa24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 EXOC1Q9NV70 894 aa24.01■■□□□ 1.43
TSPAN3-202ENST00000346495 PFASO15067 1338 aa24■■□□□ 1.43
TSPAN3-202ENST00000346495 PVALEFA0A1B0GWK0 134 aa24■■□□□ 1.43
TSPAN3-202ENST00000346495 EML1O00423 815 aa24■■□□□ 1.43
TSPAN3-202ENST00000346495 COPB2P35606 906 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms