RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SYT2Q8N9I0 419 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-201ENST00000345617 PITPNM3Q9BZ71 974 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 APOBEC2Q9Y235 224 aaKnown RBP20.88■□□□□ 0.93
HDAC4-201ENST00000345617 IL1RL1Q01638 556 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 WDR75Q8IWA0 830 aaKnown RBP20.88■□□□□ 0.93
HDAC4-201ENST00000345617 GRAMD1AQ96CP6 724 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 ADPGKQ9BRR6 497 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 SERPING1P05155 500 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 VPS54Q9P1Q0 977 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 DBNLQ9UJU6 430 aaKnown RBP20.88■□□□□ 0.93
HDAC4-201ENST00000345617 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 E2F4Q16254 413 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 NUDCD1Q96RS6 583 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 SEMA3EO15041 775 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 MAPK4P31152 587 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 MRPL28Q13084 256 aaKnown RBP20.88■□□□□ 0.93
HDAC4-201ENST00000345617 SERTAD1Q9UHV2 236 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 ZNF654Q8IZM8 581 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 MPP6Q9NZW5 540 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 SEPT3Q9UH03 358 aa20.88■□□□□ 0.93
HDAC4-201ENST00000345617 AP1B1Q10567 949 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 KRR1Q13601 381 aaKnown RBP20.87■□□□□ 0.93
HDAC4-201ENST00000345617 KRT28Q7Z3Y7 464 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 PARD6BQ9BYG5 372 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 PKD2L1Q9P0L9 805 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ADAM21Q9UKJ8 722 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 SMCO2A6NFE2 343 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ITGA6P23229 1130 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 FKBP3Q00688 224 aaKnown RBP20.87■□□□□ 0.93
HDAC4-201ENST00000345617 KIF17Q9P2E2 1029 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 CDV3Q9UKY7 258 aaKnown RBP20.87■□□□□ 0.93
HDAC4-201ENST00000345617 H7C0C1 242 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 STXBP3O00186 592 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 IL2RBP14784 551 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ATP2B4P23634 1241 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ATP5OP48047 213 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 PLTPP55058 493 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ACAD11Q709F0 780 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 RMDN2Q96LZ7 410 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 C19orf44Q9H6X5 657 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ZNF212Q9UDV6 495 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ARHGEF37A1IGU5 675 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 RTCBQ9Y3I0 505 aaKnown RBP20.87■□□□□ 0.93
HDAC4-201ENST00000345617 TARSL2A2RTX5 802 aaKnown RBP20.87■□□□□ 0.93
HDAC4-201ENST00000345617 SERPINB4P48594 390 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 KRT38O76015 456 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 SF3A3Q12874 501 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■■■■■ 34
HDAC4-201ENST00000345617 PARP9Q8IXQ6 854 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 THAP9Q9H5L6 903 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 C10orf88Q9H8K7 445 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ZFP69BQ9UJL9 534 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 DEAF1O75398 565 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-201ENST00000345617 SLFN14P0C7P3 912 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 RHOT2Q8IXI1 618 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 PPM1KQ8N3J5 372 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 FAM227BQ96M60 508 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 ZBTB18Q99592 522 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 SLC5A4Q9NY91 659 aa20.87■□□□□ 0.93
HDAC4-201ENST00000345617 OCRLQ01968 901 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 VSTM4Q8IW00 320 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 SYMPKQ92797 1274 aaKnown RBP20.86■□□□□ 0.93
HDAC4-201ENST00000345617 TBC1D23Q9NUY8 699 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 CPA1P15085 419 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 LRRC63Q05C16 580 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 PSMD2Q13200 908 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 DEPDC1BQ8WUY9 529 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 TRPC5Q9UL62 973 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-201ENST00000345617 TAF1BQ53T94 588 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-201ENST00000345617 STX19Q8N4C7 294 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 GOLGA8TH3BQL2 631 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 GOLGA8HP0CJ92 632 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 C1orf146Q5VVC0 180 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 NELFCDQ8IXH7 590 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 GTPBP10A4D1E9 387 aaKnown RBP20.86■□□□□ 0.93
HDAC4-201ENST00000345617 H0Y626 953 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 TRIM16O95361 564 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 C4BPBP20851 252 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 SEMA3FQ13275 785 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 NPR1P16066 1061 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 RNF169Q8NCN4 708 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 BPIFA3Q9BQP9 254 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 WARS2Q9UGM6 360 aaKnown RBP20.86■□□□□ 0.93
HDAC4-201ENST00000345617 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
HDAC4-201ENST00000345617 GRID2IPA4D2P6 1211 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 TOM1L1O75674 476 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ZBED6P86452 979 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 MED21Q13503 144 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 KAZNQ674X7 775 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 DYDC2Q96IM9 177 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ZBED4O75132 1171 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 AFPP02771 609 aaKnown RBP20.85■□□□□ 0.93
HDAC4-201ENST00000345617 ANXA1P04083 346 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 TJP3O95049 919 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 PLS3P13797 630 aa20.85■□□□□ 0.93
HDAC4-201ENST00000345617 TFAP4Q01664 338 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms