RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PSMC6P62333 389 aa15.78■□□□□ 0.12
TPM4-202ENST00000344824 HABP4Q5JVS0 413 aaKnown RBP15.78■□□□□ 0.12
TPM4-202ENST00000344824 SH3RF1Q7Z6J0 888 aa15.78■□□□□ 0.12
TPM4-202ENST00000344824 ELP1O95163 1332 aa15.78■□□□□ 0.12
TPM4-202ENST00000344824 DCDC2CA8MYV0 355 aa15.77■□□□□ 0.12
TPM4-202ENST00000344824 GH1P01241 217 aa15.77■□□□□ 0.12
TPM4-202ENST00000344824 FDPSP14324 419 aaKnown RBP15.77■□□□□ 0.12
TPM4-202ENST00000344824 FUT2Q10981 343 aa15.77■□□□□ 0.12
TPM4-202ENST00000344824 FOXD4L5Q5VV16 416 aaPredicted RBP15.77■□□□□ 0.12
TPM4-202ENST00000344824 FOXD4L4Q8WXT5 416 aaPredicted RBP15.77■□□□□ 0.12
TPM4-202ENST00000344824 AIFM3Q96NN9 605 aa15.77■□□□□ 0.12
TPM4-202ENST00000344824 POLR3EQ9NVU0 708 aa15.77■□□□□ 0.12
TPM4-202ENST00000344824 MROH7Q68CQ1 1323 aa15.77■□□□□ 0.12
TPM4-202ENST00000344824 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 ARVCFO00192 962 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 MEIS2O14770 477 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 CABYRO75952 493 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 ADCY7P51828 1080 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 GUCY1B3Q02153 619 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 GNPTABQ3T906 1256 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 C1orf53Q5VUE5 145 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.11
TPM4-202ENST00000344824 PPP1R13LQ8WUF5 828 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 PGBD1Q96JS3 809 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 ALG1Q9BT22 464 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.11
TPM4-202ENST00000344824 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.11
TPM4-202ENST00000344824 TMEM39AQ9NV64 488 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 KIF3AQ9Y496 699 aa15.77■□□□□ 0.11
TPM4-202ENST00000344824 STK36Q9NRP7 1315 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 VPS37CA5D8V6 355 aaPredicted RBP15.76■□□□□ 0.11
TPM4-202ENST00000344824 TLR3O15455 904 aaKnown RBP15.76■□□□□ 0.11
TPM4-202ENST00000344824 DDIT3P35638 169 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 ITGA7Q13683 1181 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 PKP1Q13835 747 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 PPP1R18Q6NYC8 613 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 CCDC62Q6P9F0 684 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 VSIG10LQ86VR7 867 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
TPM4-202ENST00000344824 AFG1LQ8WV93 481 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 GDF15Q99988 308 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 FRMPD4Q14CM0 1322 aa15.76■□□□□ 0.11
TPM4-202ENST00000344824 TRIM43BA6NCK2 446 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 H3BQV1 296 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 hCG_1984214I3L0E3 225 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 STXBP3O00186 592 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 PIK3CDO00329 1044 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
TPM4-202ENST00000344824 RGS20O76081 388 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 DEXIO95424 95 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 GGPS1O95749 300 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 MMP3P08254 477 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 SCG2P13521 617 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 RAG1P15918 1043 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 SYT1P21579 422 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 NKX3-2P78367 333 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 PURAQ00577 322 aaKnown RBP15.75■□□□□ 0.11
TPM4-202ENST00000344824 ARHGAP1Q07960 439 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 ZNF713Q8N859 430 aaPredicted RBP15.75■□□□□ 0.11
TPM4-202ENST00000344824 TRIM43Q96BQ3 446 aaPredicted RBP15.75■□□□□ 0.11
TPM4-202ENST00000344824 PPP1R12CQ9BZL4 782 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 GJB4Q9NTQ9 266 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
TPM4-202ENST00000344824 DDX41Q9UJV9 622 aaKnown RBP15.75■□□□□ 0.11
TPM4-202ENST00000344824 TRIP12Q14669 1992 aaPredicted RBP15.75■□□□□ 0.11
TPM4-202ENST00000344824 KAT6AQ92794 2004 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 SMCO2A6NFE2 343 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 PDCP20941 246 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 UBA1P22314 1058 aaKnown RBP15.74■□□□□ 0.11
TPM4-202ENST00000344824 MRPS9P82933 396 aaKnown RBP15.74■□□□□ 0.11
TPM4-202ENST00000344824 SP4Q02446 784 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 PFKFB3Q16875 520 aaPredicted RBP15.74■□□□□ 0.11
TPM4-202ENST00000344824 ANKRD33Q7Z3H0 272 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 WASF1Q92558 559 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 BADQ92934 168 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 C8orf76Q96K31 380 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 MTG1Q9BT17 334 aaPredicted RBP15.74■□□□□ 0.11
TPM4-202ENST00000344824 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 BARHL2Q9NY43 387 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 PCDHA6Q9UN73 950 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 PCDHA8Q9Y5H6 950 aa15.74■□□□□ 0.11
TPM4-202ENST00000344824 A6NJR5 290 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 STX6O43752 255 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 ZNF286BP0CG31 522 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 FAAP100Q0VG06 881 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 PKN1Q16512 942 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 KCNV1Q6PIU1 500 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 SPATA33Q96N06 139 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 RIC8AQ9NPQ8 531 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
TPM4-202ENST00000344824 TANC1Q9C0D5 1861 aa15.73■□□□□ 0.11
TPM4-202ENST00000344824 SCN5AQ14524 2016 aa15.72■□□□□ 0.11
TPM4-202ENST00000344824 TRIM29Q14134 588 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms