RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 TOP1MTQ969P6 601 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 TAAR1Q96RJ0 339 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 TMEM47Q9BQJ4 181 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 KATNAL1Q9BW62 490 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 KIAA1217Q5T5P2 1943 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 EMSYQ7Z589 1322 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 GFRA3O60609 400 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 F2P00734 622 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 PLEKHG4Q58EX7 1191 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 BMP8AQ7Z5Y6 402 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 IGFLR1Q9H665 355 aa20.82■□□□□ 0.92
MUC1-204ENST00000343256 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.81■□□□□ 0.92
MUC1-204ENST00000343256 FOXP2O15409 715 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 LINC01565O15544 149 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 SORBS3O60504 671 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 TBX10O75333 385 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 CTNNB1P35222 781 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 SMAD4Q13485 552 aaKnown RBP20.81■□□□□ 0.92
MUC1-204ENST00000343256 TRIM67Q6ZTA4 783 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 COL20A1Q9P218 1284 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 DDX41Q9UJV9 622 aaKnown RBP20.81■□□□□ 0.92
MUC1-204ENST00000343256 RALGAPA2Q2PPJ7 1873 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 CFAP54Q96N23 3096 aa20.81■□□□□ 0.92
MUC1-204ENST00000343256 WDR19Q8NEZ3 1342 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 MYH7BA7E2Y1 1941 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 KMT2EQ8IZD2 1858 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 GRM6O15303 877 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 NCK2O43639 380 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 PDHBP11177 359 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 TOP1P11387 765 aaKnown RBP20.8■□□□□ 0.92
MUC1-204ENST00000343256 SUGP1Q8IWZ8 645 aaKnown RBP20.8■□□□□ 0.92
MUC1-204ENST00000343256 DDX19BQ9UMR2 479 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 ZDBF2Q9HCK1 2354 aa20.8■□□□□ 0.92
MUC1-204ENST00000343256 IFIH1Q9BYX4 1025 aaKnown RBP20.79■□□□□ 0.92
MUC1-204ENST00000343256 CPVLQ9H3G5 476 aa20.79■□□□□ 0.92
MUC1-204ENST00000343256 TOMM22Q9NS69 142 aa20.79■□□□□ 0.92
MUC1-204ENST00000343256 CD207Q9UJ71 328 aa20.79■□□□□ 0.92
MUC1-204ENST00000343256 COL4A6Q14031 1691 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 CTSHP09668 335 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 ZNF543Q08ER8 600 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 STXBP2Q15833 593 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 RRP12Q5JTH9 1297 aaKnown RBP20.78■□□□□ 0.92
MUC1-204ENST00000343256 SERINC5Q86VE9 423 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 PPTC7Q8NI37 304 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 SYTL5Q8TDW5 730 aaPredicted RBP20.78■□□□□ 0.92
MUC1-204ENST00000343256 SEPT8Q92599 483 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
MUC1-204ENST00000343256 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 ALG13Q9NP73 1137 aaKnown RBP20.78■□□□□ 0.92
MUC1-204ENST00000343256 PNMA2Q9UL42 364 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 MRVI1Q9Y6F6 885 aa20.78■□□□□ 0.92
MUC1-204ENST00000343256 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 EIF2AK2P19525 551 aaKnown RBP20.77■□□□□ 0.92
MUC1-204ENST00000343256 ZXDAP98168 799 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 LAMC2Q13753 1193 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 ZMYM1Q5SVZ6 1142 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 FIBCD1Q8N539 461 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 RGS22Q8NE09 1264 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 NSUN6Q8TEA1 469 aaKnown RBP20.77■□□□□ 0.92
MUC1-204ENST00000343256 RMDN3Q96TC7 470 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 PRRX2Q99811 253 aa20.77■□□□□ 0.92
MUC1-204ENST00000343256 ZFHX2Q9C0A1 2572 aaPredicted RBP20.76■□□□□ 0.91
MUC1-204ENST00000343256 ORC4O43929 436 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 LINC00271P0C7V0 271 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 GOLGA8HP0CJ92 632 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 VCPP55072 806 aaKnown RBP20.76■□□□□ 0.91
MUC1-204ENST00000343256 FBXL6Q8N531 539 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 ATP6V0A1Q93050 837 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 IL17RAQ96F46 866 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 FSD1Q9BTV5 496 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 UBA5Q9GZZ9 404 aa20.76■□□□□ 0.91
MUC1-204ENST00000343256 C5orf67F2Z3F1 127 aa20.75■□□□□ 0.91
MUC1-204ENST00000343256 BMPR1AP36894 532 aa20.75■□□□□ 0.91
MUC1-204ENST00000343256 VPS53Q5VIR6 699 aa20.75■□□□□ 0.91
MUC1-204ENST00000343256 ARHGEF16Q5VV41 709 aa20.75■□□□□ 0.91
MUC1-204ENST00000343256 LMAN2LQ9H0V9 348 aa20.75■□□□□ 0.91
MUC1-204ENST00000343256 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
MUC1-204ENST00000343256 C17orf102A2RUQ5 167 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 TREHO43280 583 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 RB1P06400 928 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 MS4A1P11836 297 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 NDUFV1P49821 464 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 ADAM15Q13444 863 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 PKN1Q16512 942 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 HSDL1Q3SXM5 330 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 ATOH1Q92858 354 aaPredicted RBP20.74■□□□□ 0.91
MUC1-204ENST00000343256 IWS1Q96ST2 819 aa20.74■□□□□ 0.91
MUC1-204ENST00000343256 C11orf84Q9BUA3 381 aaPredicted RBP20.74■□□□□ 0.91
MUC1-204ENST00000343256 HOXD8P13378 290 aaPredicted RBP20.73■□□□□ 0.91
MUC1-204ENST00000343256 CDC37Q16543 378 aaPredicted RBP20.73■□□□□ 0.91
MUC1-204ENST00000343256 MSLNLQ96KJ4 702 aa20.73■□□□□ 0.91
MUC1-204ENST00000343256 SPATA33Q96N06 139 aa20.73■□□□□ 0.91
MUC1-204ENST00000343256 LOC730098B7Z3J9 87 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 PPFIA4O75335 1185 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 EIF3JO75822 258 aaKnown RBP20.72■□□□□ 0.91
MUC1-204ENST00000343256 NR3C2P08235 984 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 FGRP09769 529 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 SNHG28P0DPA3 235 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 FOXK2Q01167 660 aa20.72■□□□□ 0.91
MUC1-204ENST00000343256 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms