RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 RIOX1Q9H6W3 641 aa26.6■■□□□ 1.85
NELFB-201ENST00000343053 ALS2CR12Q96Q35 445 aa26.59■■□□□ 1.85
NELFB-201ENST00000343053 STK17AQ9UEE5 414 aa26.59■■□□□ 1.85
NELFB-201ENST00000343053 ZSCAN5CA6NGD5 496 aaPredicted RBP26.59■■□□□ 1.85
NELFB-201ENST00000343053 COASYQ13057 564 aa26.59■■□□□ 1.85
NELFB-201ENST00000343053 KCTD1Q719H9 257 aa26.59■■□□□ 1.85
NELFB-201ENST00000343053 DNAAF5Q86Y56 855 aa26.59■■□□□ 1.85
NELFB-201ENST00000343053 RBM12Q9NTZ6 932 aaKnown RBP26.59■■□□□ 1.85
NELFB-201ENST00000343053 ESYT3A0FGR9 886 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 E9PMD0 336 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 FXR2P51116 673 aaKnown RBP eCLIP26.58■■□□□ 1.858e-8■■■□□ 16.6
NELFB-201ENST00000343053 PDXDC1Q6P996 788 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 MTMR4Q9NYA4 1195 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 RIMBP2O15034 1052 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 FTCDO95954 541 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 HNRNPH3P31942 346 aaKnown RBP26.58■■□□□ 1.85
NELFB-201ENST00000343053 IQCEQ6IPM2 695 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 CCDC70Q6NSX1 233 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 AENQ8WTP8 325 aaKnown RBP26.58■■□□□ 1.85
NELFB-201ENST00000343053 MXD3Q9BW11 206 aa26.58■■□□□ 1.85
NELFB-201ENST00000343053 DDX25Q9UHL0 483 aaKnown RBP26.58■■□□□ 1.85
NELFB-201ENST00000343053 PPP1R2P41236 205 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 POLR2FP61218 127 aaKnown RBP26.57■■□□□ 1.84
NELFB-201ENST00000343053 LSM14BQ9BX40 385 aaKnown RBP26.57■■□□□ 1.84
NELFB-201ENST00000343053 FAM184BQ9ULE4 1060 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 HYOU1Q9Y4L1 999 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 PVALEFA0A1B0GWK0 134 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 FAM170AA1A519 330 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 C6orf229H3BNL8 230 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 IVLP07476 585 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 FAM196AQ6ZSG2 479 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 CCDC84Q86UT8 332 aaPredicted RBP26.57■■□□□ 1.84
NELFB-201ENST00000343053 ADGRF4Q8IZF3 695 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 MYOCDQ8IZQ8 938 aa26.57■■□□□ 1.84
NELFB-201ENST00000343053 PDE4CQ08493 712 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 SEMA3FQ13275 785 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 RC3H1Q5TC82 1133 aaKnown RBP26.56■■□□□ 1.84
NELFB-201ENST00000343053 TSEN2Q8NCE0 465 aaKnown RBP26.56■■□□□ 1.84
NELFB-201ENST00000343053 HAS1Q92839 578 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 TSG101Q99816 390 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 TLR10Q9BXR5 811 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 JMJD4Q9H9V9 463 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 GGA1Q9UJY5 639 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 MYH7BA7E2Y1 1941 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 GOLGA6CA6NDK9 693 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 MPHOSPH10O00566 681 aaKnown RBP26.56■■□□□ 1.84
NELFB-201ENST00000343053 GOLGA6DP0CG33 693 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 GTF2IP78347 998 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 LRRC63Q05C16 580 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 HGSNATQ68CP4 663 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 HAUS3Q68CZ6 603 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 PRR5LQ6MZQ0 368 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.56■■□□□ 1.84
NELFB-201ENST00000343053 RAB34Q9BZG1 259 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 PANK4Q9NVE7 773 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 GOLGA6AQ9NYA3 693 aa26.56■■□□□ 1.84
NELFB-201ENST00000343053 TLR2O60603 784 aa26.55■■□□□ 1.84
NELFB-201ENST00000343053 RASSF4Q9H2L5 321 aa26.55■■□□□ 1.84
NELFB-201ENST00000343053 DDX4Q9NQI0 724 aaKnown RBP26.55■■□□□ 1.84
NELFB-201ENST00000343053 POLLQ9UGP5 575 aa26.55■■□□□ 1.84
NELFB-201ENST00000343053 DAGLAQ9Y4D2 1042 aa26.55■■□□□ 1.84
NELFB-201ENST00000343053 DNAJC19Q96DA6 116 aa26.55■■□□□ 1.84
NELFB-201ENST00000343053 BTAF1O14981 1849 aa26.55■■□□□ 1.84
NELFB-201ENST00000343053 POTEB3A0JP26 581 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 POTECB2RU33 542 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L15C9J2P7 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L10C9JJH3 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L13C9JLJ4 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L11C9JVI0 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L18D6R9N7 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L22D6RA61 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L17D6RBQ6 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L19D6RCP7 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L20D6RJB6 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 STAT3P40763 770 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L24Q0WX57 530 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 RAPGEF1Q13905 1077 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 FAM26FQ5R3K3 315 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 TRAPPC3LQ5T215 181 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 KLHDC7AQ5VTJ3 777 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 USP17L6PQ6QN14 398 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 POTEBQ6S5H4 581 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 MMGT1Q8N4V1 131 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 NGLY1Q96IV0 654 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 PACSIN1Q9BY11 444 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 KIAA1024Q9UPX6 916 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 ESYT2A0FGR8 921 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 SHROOM1Q2M3G4 852 aaPredicted RBP26.54■■□□□ 1.84
NELFB-201ENST00000343053 C8orf74Q6P047 294 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 COL4A3BPQ9Y5P4 624 aa26.54■■□□□ 1.84
NELFB-201ENST00000343053 NOL4O94818 638 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 PPARDQ03181 441 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 TMEM119Q4V9L6 283 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 COBLL1Q53SF7 1204 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 FAM83BQ5T0W9 1011 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 FAM76AQ8TAV0 307 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 GOLPH3Q9H4A6 298 aa26.53■■□□□ 1.84
NELFB-201ENST00000343053 PALMO75781 387 aa26.52■■□□□ 1.84
NELFB-201ENST00000343053 FGFR1OPO95684 399 aaKnown RBP26.52■■□□□ 1.84
NELFB-201ENST00000343053 SCNN1DP51172 638 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms