RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.27
SNX18-202ENST00000343017 HGSNATQ68CP4 663 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 MSL1Q68DK7 614 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 ARFGAP2Q8N6H7 521 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 CCT6BQ92526 530 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 INPP4AQ96PE3 977 aaPredicted RBP16.77■□□□□ 0.27
SNX18-202ENST00000343017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.77■□□□□ 0.27
SNX18-202ENST00000343017 TRIM9Q9C026 710 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 MYH2Q9UKX2 1941 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
SNX18-202ENST00000343017 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 KCNK3O14649 394 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 PJA2O43164 708 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 PPP2R2AP63151 447 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 NSMCE1Q8WV22 266 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 GGT7Q9UJ14 662 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 BICDL2A1A5D9 508 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 MGRN1O60291 552 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 TLR2O60603 784 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 RCAN1P53805 252 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 XRCC4Q13426 336 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 ARL6IP4Q66PJ3 421 aaKnown RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 BLIDQ8IZY5 108 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 TATDN2Q93075 761 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 PLA2G12BQ9BX93 195 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 DDX47Q9H0S4 455 aaKnown RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 EIF4E1BA6NMX2 242 aaKnown RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 PEX19P40855 299 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 LRRC41Q15345 812 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 TXNRD1Q16881 649 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 GKAP1Q5VSY0 366 aaPredicted RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 TBC1D1Q86TI0 1168 aaPredicted RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 USP38Q8NB14 1042 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
SNX18-202ENST00000343017 PHRF1Q9P1Y6 1649 aaKnown RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
SNX18-202ENST00000343017 EME2A4GXA9 379 aaPredicted RBP16.75■□□□□ 0.27
SNX18-202ENST00000343017 WTIPA6NIX2 430 aaPredicted RBP16.75■□□□□ 0.27
SNX18-202ENST00000343017 FGFR2P21802 821 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 TRAPPC10P48553 1259 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 NLRP10Q86W26 655 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 BUB1BO60566 1050 aaPredicted RBP16.75■□□□□ 0.27
SNX18-202ENST00000343017 GNAT2P19087 354 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 DRD4P21917 467 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
SNX18-202ENST00000343017 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
SNX18-202ENST00000343017 DAPK3O43293 454 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 CEP104O60308 925 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 PPP2R5BQ15173 497 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 KRT71Q3SY84 523 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 FAM133BQ5BKY9 247 aaKnown RBP16.74■□□□□ 0.27
SNX18-202ENST00000343017 KIF6Q6ZMV9 814 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 TRIM31Q9BZY9 425 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNX18-202ENST00000343017 GLI3P10071 1580 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 PFKFB3Q16875 520 aaPredicted RBP16.74■□□□□ 0.27
SNX18-202ENST00000343017 MEI1Q5TIA1 1274 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 CABP7Q86V35 215 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 CCDC50Q8IVM0 306 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 ISCUQ9H1K1 167 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 A0A087X0T9 212 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 PPIP5K2O43314 1243 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 FAM228BP0C875 321 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 ITGA4P13612 1032 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 MTFR1LQ9H019 292 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
SNX18-202ENST00000343017 GRID2IPA4D2P6 1211 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 UPP2O95045 317 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 SLC5A1P13866 664 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 SLC8A1P32418 973 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 LACTB2Q53H82 288 aaPredicted RBP16.73■□□□□ 0.27
SNX18-202ENST00000343017 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
SNX18-202ENST00000343017 CUL5Q93034 780 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 SPDL1Q96EA4 605 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNX18-202ENST00000343017 TRIM37O94972 964 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 GCKP35557 465 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 TNNC1P63316 161 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 TRIM28Q13263 835 aaKnown RBP16.73■□□□□ 0.27
SNX18-202ENST00000343017 BIRC2Q13490 618 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 NAB2Q15742 525 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 FMNL3Q8IVF7 1028 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 CELF4Q9BZC1 486 aaKnown RBP16.73■□□□□ 0.27
SNX18-202ENST00000343017 KIF9Q9HAQ2 790 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 PANK4Q9NVE7 773 aa16.73■□□□□ 0.27
SNX18-202ENST00000343017 AMACRQ9UHK6 382 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms