RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 TOP1MTQ969P6 601 aa19.8■□□□□ 0.76
TRA2B-202ENST00000342294 NSUN3Q9H649 340 aaKnown RBP19.8■□□□□ 0.76
TRA2B-202ENST00000342294 TOMM22Q9NS69 142 aa19.8■□□□□ 0.76
TRA2B-202ENST00000342294 RSPH10B2B2RC85 870 aa19.79■□□□□ 0.76
TRA2B-202ENST00000342294 EIF3JO75822 258 aaKnown RBP19.79■□□□□ 0.76
TRA2B-202ENST00000342294 FGAP02671 866 aa19.79■□□□□ 0.76
TRA2B-202ENST00000342294 RSPH10BP0C881 870 aa19.79■□□□□ 0.76
TRA2B-202ENST00000342294 GPATCH4Q5T3I0 446 aaKnown RBP19.79■□□□□ 0.76
TRA2B-202ENST00000342294 FBXO11Q86XK2 927 aa19.79■□□□□ 0.76
TRA2B-202ENST00000342294 RMDN3Q96TC7 470 aa19.79■□□□□ 0.76
TRA2B-202ENST00000342294 UPF3BQ9BZI7 483 aaKnown RBP19.79■□□□□ 0.76
TRA2B-202ENST00000342294 CPVLQ9H3G5 476 aa19.79■□□□□ 0.76
TRA2B-202ENST00000342294 ABCB11O95342 1321 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 COL4A6Q14031 1691 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 PPFIA4O75335 1185 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 CTC1Q2NKJ3 1217 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 MFSD14AQ96MC6 490 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 UBA5Q9GZZ9 404 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 MICAL3Q7RTP6 2002 aa19.78■□□□□ 0.76
TRA2B-202ENST00000342294 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.77■□□□□ 0.76
TRA2B-202ENST00000342294 NCK2O43639 380 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 GOLGA8HP0CJ92 632 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 HOXC8P31273 242 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 THPOP40225 353 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 SMAD2Q15796 467 aaKnown RBP19.77■□□□□ 0.76
TRA2B-202ENST00000342294 HERC4Q5GLZ8 1057 aaPredicted RBP19.77■□□□□ 0.76
TRA2B-202ENST00000342294 MYSM1Q5VVJ2 828 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 EP400NLQ6ZTU2 488 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 DHX37Q8IY37 1157 aaKnown RBP19.77■□□□□ 0.76
TRA2B-202ENST00000342294 YME1L1Q96TA2 773 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 OSBPL7Q9BZF2 842 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 CLDND1Q9NY35 253 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 MRVI1Q9Y6F6 885 aa19.77■□□□□ 0.76
TRA2B-202ENST00000342294 RGS20O76081 388 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 NR3C2P08235 984 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 EIF2AK2P19525 551 aaKnown RBP19.76■□□□□ 0.75
TRA2B-202ENST00000342294 CDC37Q16543 378 aaPredicted RBP19.76■□□□□ 0.75
TRA2B-202ENST00000342294 RPAINQ86UA6 219 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 MCF2L2Q86YR7 1114 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 PHOX2BQ99453 314 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 C16orf70Q9BSU1 422 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 HELLSQ9NRZ9 838 aa19.76■□□□□ 0.75
TRA2B-202ENST00000342294 WDFY4Q6ZS81 3184 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 HSDL1Q3SXM5 330 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 ARHGEF16Q5VV41 709 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 SEPT8Q92599 483 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 PXMP2Q9NR77 195 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 MUTYHQ9UIF7 546 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 MYO7AQ13402 2215 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 SALL3Q9BXA9 1300 aa19.75■□□□□ 0.75
TRA2B-202ENST00000342294 KIAA1217Q5T5P2 1943 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 C5orf67F2Z3F1 127 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 MBTPS2O43462 519 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 UPP2O95045 317 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 LINC00271P0C7V0 271 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 MX1P20591 662 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 DLX2Q07687 328 aaPredicted RBP19.74■□□□□ 0.75
TRA2B-202ENST00000342294 HYAL1Q12794 435 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 CELF3Q5SZQ8 465 aaKnown RBP19.74■□□□□ 0.75
TRA2B-202ENST00000342294 ADGRF4Q8IZF3 695 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 ZMYM6O95789 1325 aa19.74■□□□□ 0.75
TRA2B-202ENST00000342294 TECTAO75443 2155 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 PCP11498 1178 aaKnown RBP19.73■□□□□ 0.75
TRA2B-202ENST00000342294 GHRHRQ02643 423 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 QRICH1Q2TAL8 776 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 BMP8AQ7Z5Y6 402 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 DGKHQ86XP1 1220 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 RNF135Q8IUD6 432 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 MIER1Q8N108 512 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 PRSS33Q8NF86 280 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 ATP6V0A1Q93050 837 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 SPATA33Q96N06 139 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 POP1Q99575 1024 aaKnown RBP19.73■□□□□ 0.75
TRA2B-202ENST00000342294 RCAN3Q9UKA8 241 aa19.73■□□□□ 0.75
TRA2B-202ENST00000342294 MRPL11Q9Y3B7 192 aaKnown RBP19.73■□□□□ 0.75
TRA2B-202ENST00000342294 C17orf102A2RUQ5 167 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 OPLAHO14841 1288 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 CAND2O75155 1236 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 RB1P06400 928 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
TRA2B-202ENST00000342294 HSD17B4P51659 736 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 HAND2P61296 217 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 SP2Q02086 613 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 MFSD6Q6ZSS7 791 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 EDAQ92838 391 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 IFIH1Q9BYX4 1025 aaKnown RBP19.72■□□□□ 0.75
TRA2B-202ENST00000342294 LMAN2LQ9H0V9 348 aa19.72■□□□□ 0.75
TRA2B-202ENST00000342294 GRM6O15303 877 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 TREHO43280 583 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 GGPS1O95749 300 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 BMPR1AP36894 532 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 CLUL1Q15846 466 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 KCNV1Q6PIU1 500 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 TBC1D10CQ8IV04 446 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 EVI5LQ96CN4 794 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 IL17RAQ96F46 866 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 FAM227BQ96M60 508 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 PDCD2LQ9BRP1 358 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 RNPEPQ9H4A4 650 aa19.71■□□□□ 0.75
TRA2B-202ENST00000342294 A0A0D9SFI3 127 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms