RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 RPAINQ86UA6 219 aa19.23■□□□□ 0.67
NECTIN1-202ENST00000340882 RGS22Q8NE09 1264 aa19.23■□□□□ 0.67
NECTIN1-202ENST00000340882 NSUN3Q9H649 340 aaKnown RBP19.23■□□□□ 0.67
NECTIN1-202ENST00000340882 DCTPP1Q9H773 170 aa19.23■□□□□ 0.67
NECTIN1-202ENST00000340882 COL4A6Q14031 1691 aa19.23■□□□□ 0.67
NECTIN1-202ENST00000340882 KMT2EQ8IZD2 1858 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 B4DLN1 442 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 SORBS3O60504 671 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 UPP2O95045 317 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 SNHG28P0DPA3 235 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 MRPL12P52815 198 aaKnown RBP19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 FBXO11Q86XK2 927 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 UBA5Q9GZZ9 404 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 TOMM22Q9NS69 142 aa19.22■□□□□ 0.67
NECTIN1-202ENST00000340882 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 RSPH10B2B2RC85 870 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 RSPH10BP0C881 870 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 THPOP40225 353 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 CTC1Q2NKJ3 1217 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 TOP1MTQ969P6 601 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 EMID1Q96A84 441 aaPredicted RBP19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 SAMD11Q96NU1 681 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 YME1L1Q96TA2 773 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 KATNAL1Q9BW62 490 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 TCP11L1Q9NUJ3 509 aa19.21■□□□□ 0.67
NECTIN1-202ENST00000340882 DOCK5Q9H7D0 1870 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 MBTPS2O43462 519 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 GTF2F1P35269 517 aaKnown RBP eCLIP19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 HYAL1Q12794 435 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 SMAD2Q15796 467 aaKnown RBP19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 STXBP2Q15833 593 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 HERC4Q5GLZ8 1057 aaPredicted RBP19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 SERINC5Q86VE9 423 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 RNF135Q8IUD6 432 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 PPTC7Q8NI37 304 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 NSUN6Q8TEA1 469 aaKnown RBP19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 MFSD14AQ96MC6 490 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 RMDN3Q96TC7 470 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 PNMA2Q9UL42 364 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 FAM50BQ9Y247 325 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 EMSYQ7Z589 1322 aa19.2■□□□□ 0.66
NECTIN1-202ENST00000340882 LINC00271P0C7V0 271 aa19.19■□□□□ 0.66
NECTIN1-202ENST00000340882 HOXD8P13378 290 aaPredicted RBP19.19■□□□□ 0.66
NECTIN1-202ENST00000340882 EIF2AK2P19525 551 aaKnown RBP19.19■□□□□ 0.66
NECTIN1-202ENST00000340882 DHX37Q8IY37 1157 aaKnown RBP19.19■□□□□ 0.66
NECTIN1-202ENST00000340882 UPF3BQ9BZI7 483 aaKnown RBP19.19■□□□□ 0.66
NECTIN1-202ENST00000340882 GRM6O15303 877 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 LINC01565O15544 149 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 TBX10O75333 385 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 RGS20O76081 388 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 LAMC2Q13753 1193 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 CDC37Q16543 378 aaPredicted RBP19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 HSDL1Q3SXM5 330 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 IWS1Q96ST2 819 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 C16orf70Q9BSU1 422 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 TTC41PQ6P2S7 1318 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 KIAA1671Q9BY89 1806 aa19.18■□□□□ 0.66
NECTIN1-202ENST00000340882 FGAP02671 866 aa19.17■□□□□ 0.66
NECTIN1-202ENST00000340882 ALX1Q15699 326 aa19.17■□□□□ 0.66
NECTIN1-202ENST00000340882 MYSM1Q5VVJ2 828 aa19.17■□□□□ 0.66
NECTIN1-202ENST00000340882 EDAQ92838 391 aa19.17■□□□□ 0.66
NECTIN1-202ENST00000340882 CHMP4BQ9H444 224 aaKnown RBP19.17■□□□□ 0.66
NECTIN1-202ENST00000340882 ZDBF2Q9HCK1 2354 aa19.17■□□□□ 0.66
NECTIN1-202ENST00000340882 TREHO43280 583 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 EIF3JO75822 258 aaKnown RBP19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 CSPG5O95196 566 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 NR3C2P08235 984 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 CTSHP09668 335 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 HAND2P61296 217 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 SP2Q02086 613 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 TCF15Q12870 199 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 ARHGEF16Q5VV41 709 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 SEPT8Q92599 483 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 ZKSCAN3Q9BRR0 538 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 IFIH1Q9BYX4 1025 aaKnown RBP19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 BCAS3Q9H6U6 928 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 ALG13Q9NP73 1137 aaKnown RBP19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 PXMP2Q9NR77 195 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 ABCB11O95342 1321 aa19.16■□□□□ 0.66
NECTIN1-202ENST00000340882 PPFIA4O75335 1185 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 HOXC8P31273 242 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 CTNNB1P35222 781 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 ADGRF4Q8IZF3 695 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 GPKOWQ92917 476 aaPredicted RBP eCLIP19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 ATP6V0A1Q93050 837 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 ZFP91Q96JP5 570 aaPredicted RBP19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 TTC14Q96N46 770 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 IGFLR1Q9H665 355 aa19.15■□□□□ 0.66
NECTIN1-202ENST00000340882 C17orf102A2RUQ5 167 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 C5orf67F2Z3F1 127 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 STXBP3O00186 592 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 OPLAHO14841 1288 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 QRICH1Q2TAL8 776 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 CELF3Q5SZQ8 465 aaKnown RBP19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 BMP8AQ7Z5Y6 402 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 SPATA33Q96N06 139 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 RNPEPQ9H4A4 650 aa19.14■□□□□ 0.65
NECTIN1-202ENST00000340882 ZFHX2Q9C0A1 2572 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms