RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-201ENST00000340611 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 PSTPIP2Q9H939 334 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 PPP1R12AO14974 1030 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-201ENST00000340611 ATP8B1O43520 1251 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 GRIN3BO60391 1043 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 PNOCQ13519 176 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 VGLL4Q14135 290 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 MAP9Q49MG5 647 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 EPSTI1Q96J88 318 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 CENPFP49454 3210 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 VCAM1P19320 739 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 DOCK1Q14185 1865 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 CCP110O43303 1012 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 EDIL3O43854 480 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
BRAT1-201ENST00000340611 GNA11P29992 359 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 KRI1Q8N9T8 703 aaKnown RBP16.81■□□□□ 0.28
BRAT1-201ENST00000340611 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-201ENST00000340611 HOMER2Q9NSB8 354 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 ZNF112Q9UJU3 913 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 PPP2R2CQ9Y2T4 447 aa16.81■□□□□ 0.28
BRAT1-201ENST00000340611 OPLAHO14841 1288 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-201ENST00000340611 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 PP2D1A8MPX8 630 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 TDP2O95551 362 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 TUBB4AP04350 444 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 PAX7P23759 505 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 CNNM3Q8NE01 707 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.8■□□□□ 0.28
BRAT1-201ENST00000340611 RPAP3Q9H6T3 665 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-201ENST00000340611 ELP3Q9H9T3 547 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 PPP6R2O75170 966 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 FLOT1O75955 427 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 SYKP43405 635 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 UBXN2AP68543 259 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 MYL5Q02045 173 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 DAGLBQ8NCG7 672 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
BRAT1-201ENST00000340611 A0A087WUV0 522 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-201ENST00000340611 IKBKBO14920 756 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 FOXN1O15353 648 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 PTPREP23469 700 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 NONOQ15233 471 aaKnown RBP eCLIP16.79■□□□□ 0.28
BRAT1-201ENST00000340611 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 VSTM4Q8IW00 320 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 SNCAIPQ9Y6H5 919 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 NBPF20Q3BBV1 942 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 BTNL9Q6UXG8 535 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 GRAMD1CQ8IYS0 662 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 CUL5Q93034 780 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 DESI2Q9BSY9 194 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 KIAA1683Q9H0B3 1180 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 SH2D4AQ9H788 454 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 RIC8AQ9NPQ8 531 aa16.79■□□□□ 0.28
BRAT1-201ENST00000340611 A0A087X0B3 334 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 FRMD3A2A2Y4 597 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 CFBP00751 764 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 CMA1P23946 247 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 BACE1P56817 501 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 KARSQ15046 597 aaKnown RBP16.78■□□□□ 0.28
BRAT1-201ENST00000340611 TOGARAM2Q6ZUX3 1019 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 PLIN2Q99541 437 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 RAVER2Q9HCJ3 691 aaKnown RBP16.78■□□□□ 0.28
BRAT1-201ENST00000340611 H0YHG0 523 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 MEIS2O14770 477 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 ZSCAN12O43309 604 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 SLC37A4O43826 429 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 ADKP55263 362 aaKnown RBP16.78■□□□□ 0.28
BRAT1-201ENST00000340611 SARNPP82979 210 aaKnown RBP16.78■□□□□ 0.28
BRAT1-201ENST00000340611 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 OTUD5Q96G74 571 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 INTS13Q9NVM9 706 aa16.78■□□□□ 0.28
BRAT1-201ENST00000340611 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 LONRF3Q496Y0 759 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 USP50Q70EL3 339 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-201ENST00000340611 C4orf32Q8N8J7 132 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 JMYQ8N9B5 988 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 OTOFQ9HC10 1997 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 PHIPQ8WWQ0 1821 aa16.77■□□□□ 0.28
BRAT1-201ENST00000340611 CUTAO60888 179 aa16.77■□□□□ 0.27
BRAT1-201ENST00000340611 RESP18Q5W5W9 173 aa16.77■□□□□ 0.27
BRAT1-201ENST00000340611 SLC30A10Q6XR72 485 aa16.77■□□□□ 0.27
BRAT1-201ENST00000340611 GPR161Q8N6U8 529 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms