RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 Q6ZUG5 572 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 HEATR3Q7Z4Q2 680 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 SESTD1Q86VW0 696 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 RAB11FIP4Q86YS3 637 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 IL31RAQ8NI17 732 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 INPP4AQ96PE3 977 aaPredicted RBP15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 AGXT2Q9BYV1 514 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 TSPYL2Q9H2G4 693 aaPredicted RBP15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 HIPK3Q9H422 1215 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 SPDYE3A6NKU9 549 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 FIBPO43427 364 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 PPFIA4O75335 1185 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 FUT2Q10981 343 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 NEDD9Q14511 834 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 SHHQ15465 462 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 NBPF20Q3BBV1 942 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 PSRC1Q6PGN9 363 aaPredicted RBP15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 USP17L6PQ6QN14 398 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 BRF1Q92994 677 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 CDHR1Q96JP9 859 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 TM6SF1Q9BZW5 370 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 TRPV6Q9H1D0 765 aa15.32■□□□□ 0.04
SIRPB3P-201ENST00000340424 GGPS1O95749 300 aa15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 EVCP57679 992 aa15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 MRPS9P82933 396 aaKnown RBP15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 FAM109BQ6ICB4 259 aaPredicted RBP15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 NLRX1Q86UT6 975 aa15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 GIMAP8Q8ND71 665 aaPredicted RBP15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 SENP7Q9BQF6 1050 aa15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 NOC4LQ9BVI4 516 aaKnown RBP15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
SIRPB3P-201ENST00000340424 SPATA31C2B4DYI2 1134 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 F2P00734 622 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 FOSP01100 380 aaPredicted RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 NAPAP54920 295 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 FAM47CQ5HY64 1035 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 WWC2Q6AWC2 1192 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 METTL7BQ6UX53 244 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 GPRASP2Q96D09 838 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 RNPC3Q96LT9 517 aaKnown RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 SPATA33Q96N06 139 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 MTIF3Q9H2K0 278 aaKnown RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 MLXIPQ9HAP2 919 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 FAM217BQ9NTX9 383 aaPredicted RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 TRMT13Q9NUP7 481 aaKnown RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 BARHL2Q9NY43 387 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 V9GY48 417 aaPredicted RBP15.3■□□□□ 0.04
SIRPB3P-201ENST00000340424 hCG_1642624A0A1W2PR95 340 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 MAFGO15525 162 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 PFKMP08237 780 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 CPA1P15085 419 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 CDC27P30260 824 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 CYP2C18P33260 490 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 ADCY7P51828 1080 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 BFSP2Q13515 415 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 PFKFB3Q16875 520 aaPredicted RBP15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 MCTP2Q6DN12 878 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 CCDC155Q8N6L0 562 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 KAT2BQ92831 832 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 IL23AQ9NPF7 189 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
SIRPB3P-201ENST00000340424 STXBP3O00186 592 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 CSF2RAP15509 400 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 RFC2P35250 354 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 EPHB4P54760 987 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 SP2Q02086 613 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 HSDL1Q3SXM5 330 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 C7orf31Q8N865 590 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 PCDHA6Q9UN73 950 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 PCDHA8Q9Y5H6 950 aa15.28■□□□□ 0.04
SIRPB3P-201ENST00000340424 MYH7BA7E2Y1 1941 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 ESYT2A0FGR8 921 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 HAS3O00219 553 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 PRPF3O43395 683 aaKnown RBP15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 SCG2P13521 617 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 ADD1P35611 737 aaKnown RBP15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 PSEN2P49810 448 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 ANAPC15P60006 121 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 AKAP17AQ02040 695 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms