RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CXCL17Q6UXB2 119 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 PCDHA4Q9UN74 947 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 SCN10AQ9Y5Y9 1956 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 A6NJR5 290 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 FIBPO43427 364 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 UBA1P22314 1058 aaKnown RBP17.42■□□□□ 0.38
UBE3B-201ENST00000340074 NPY5RQ15761 445 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 MCTP2Q6DN12 878 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 NLRX1Q86UT6 975 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 DHX37Q8IY37 1157 aaKnown RBP17.42■□□□□ 0.38
UBE3B-201ENST00000340074 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-201ENST00000340074 AFG1LQ8WV93 481 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 WASF1Q92558 559 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 VTI1AQ96AJ9 217 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 GLT1D1Q96MS3 346 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 ALG1Q9BT22 464 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 UBIAD1Q9Y5Z9 338 aa17.42■□□□□ 0.38
UBE3B-201ENST00000340074 CEP290O15078 2479 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 GGPS1O95749 300 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 XBP1P17861 261 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 ARHGAP4P98171 946 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-201ENST00000340074 CELF3Q5SZQ8 465 aaKnown RBP17.41■□□□□ 0.38
UBE3B-201ENST00000340074 MYSM1Q5VVJ2 828 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 BLIDQ8IZY5 108 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 CYP2W1Q8TAV3 490 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 CRYGNQ8WXF5 182 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 EMID1Q96A84 441 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-201ENST00000340074 GPRASP2Q96D09 838 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 MXRA8Q9BRK3 442 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 PHF20Q9BVI0 1012 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 JADE2Q9NQC1 790 aa17.41■□□□□ 0.38
UBE3B-201ENST00000340074 M0R2N6 131 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 MMP3P08254 477 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 MYL3P08590 195 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 RTP1P59025 263 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 PURAQ00577 322 aaKnown RBP17.4■□□□□ 0.38
UBE3B-201ENST00000340074 MTMR1Q13613 665 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 SNX17Q15036 470 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 C7orf61Q8IZ16 206 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 LLPHQ9BRT6 129 aaKnown RBP17.4■□□□□ 0.38
UBE3B-201ENST00000340074 BCAS3Q9H6U6 928 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 POLR3EQ9NVU0 708 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 ELP1O95163 1332 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 WDR81Q562E7 1941 aa17.4■□□□□ 0.38
UBE3B-201ENST00000340074 ZNF76P36508 570 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 TRIM60Q495X7 471 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 CEP55Q53EZ4 464 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 C1orf53Q5VUE5 145 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 SPATA33Q96N06 139 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 MLXIPQ9HAP2 919 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 ATP11BQ9Y2G3 1177 aa17.39■□□□□ 0.38
UBE3B-201ENST00000340074 ATP9AO75110 1047 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 CABYRO75952 493 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 CYP3A4P08684 503 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 MCM2P49736 904 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 FOSBP53539 338 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 NEDD9Q14511 834 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 HSDL1Q3SXM5 330 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 CYFIP1Q7L576 1253 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 CDHR1Q96JP9 859 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 SENP7Q9BQF6 1050 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 KCNH7Q9NS40 1196 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 PKD2L1Q9P0L9 805 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 TRIP12Q14669 1992 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-201ENST00000340074 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 A0A0U1RQG5 324 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-201ENST00000340074 FAM86B1E9PN63 330 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 MAFGO15525 162 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 KPNA6O60684 536 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 FAM86B2P0C5J1 330 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 KCNA2P16389 499 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 PSMC6P62333 389 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 METTL7BQ6UX53 244 aa17.38■□□□□ 0.37
UBE3B-201ENST00000340074 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-201ENST00000340074 GRIN2DO15399 1336 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 H0YGN5 161 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 ARVCFO00192 962 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 MEIS1O00470 390 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 EDIL3O43854 480 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 PQBP1O60828 265 aaKnown RBP17.37■□□□□ 0.37
UBE3B-201ENST00000340074 ARP10275 920 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 CDK7P50613 346 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 TLE2Q04725 743 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 ITGA7Q13683 1181 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 DGKDQ16760 1214 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 GIMAP8Q8ND71 665 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-201ENST00000340074 OXER1Q8TDS5 423 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 TBCKQ8TEA7 893 aa17.37■□□□□ 0.37
UBE3B-201ENST00000340074 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms