RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 IGSF22Q8N9C0 903 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 RIT2Q99578 217 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 KCNH7Q9NS40 1196 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 MSH4O15457 936 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 TRAK2O60296 914 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 FCGRTP55899 365 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 FGD4Q96M96 766 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 HOXC6P09630 235 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 C1QTNF8P60827 252 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 HTRA3P83110 453 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 LACTBP83111 547 aaPredicted RBP16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 GRIN1Q05586 938 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 IL17AQ16552 155 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 MORN1Q5T089 497 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 SYAP1Q96A49 352 aaPredicted RBP16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 RNF186Q9NXI6 227 aa16.4■□□□□ 0.22
NIPAL3-202ENST00000339255 SLC26A4O43511 780 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 GAS7O60861 476 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 COBLO75128 1261 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 PFKFB1P16118 471 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 TECP42680 631 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 MAP2K5Q13163 448 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 KIF22Q14807 665 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 LRCH2Q5VUJ6 765 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 MAMDC4Q6UXC1 1216 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 LRWD1Q9UFC0 647 aa16.39■□□□□ 0.21
NIPAL3-202ENST00000339255 TRPA1O75762 1119 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 PSMD10O75832 226 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 TGFB3P10600 412 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 ICAM3P32942 547 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 UBA7P41226 1012 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 KCNV1Q6PIU1 500 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 CCSER1Q9C0I3 900 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 TCEAL9Q9UHQ7 104 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 LOXHD1Q8IVV2 1947 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 WDR81Q562E7 1941 aa16.38■□□□□ 0.21
NIPAL3-202ENST00000339255 A0A1B0GVL5 298 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 SPATA31C2B4DYI2 1134 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 TBC1D8O95759 1140 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 ARP10275 920 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 RGS2P41220 211 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 SP3Q02447 781 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 MAP2K1Q02750 393 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 SPIRE1Q08AE8 756 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 PPP2R5CQ13362 524 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 ERMNQ8TAM6 284 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 USP6NLQ92738 828 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 MAML3Q96JK9 1138 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 APBA2Q99767 749 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 GOLPH3LQ9H4A5 285 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 KCNH3Q9ULD8 1083 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 DOCK5Q9H7D0 1870 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 RGS20O76081 388 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 LIG1P18858 919 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 SYKP43405 635 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 NDUFA8P51970 172 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 IRF5Q13568 498 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 TPRNQ4KMQ1 711 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 HAUS3Q68CZ6 603 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 GIMAP8Q8ND71 665 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 ENGASEQ8NFI3 743 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 TEKT3Q9BXF9 490 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 VTA1Q9NP79 307 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 USP25Q9UHP3 1055 aa16.37■□□□□ 0.21
NIPAL3-202ENST00000339255 NFASCO94856 1347 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 ZSWIM8A7E2V4 1837 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 POTEMA6NI47 508 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 PSMC4P43686 418 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 SPECC1Q5M775 1068 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 CCDC34Q96HJ3 373 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms