RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PANK4Q9NVE7 773 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 DDX41Q9UJV9 622 aaKnown RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 MORC2Q9Y6X9 1032 aaPredicted RBP9.85□□□□□ -0.83
SNCA-201ENST00000336904 ESYT2A0FGR8 921 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 EGFRP00533 1210 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 ZNF76P36508 570 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 ARHGAP4P98171 946 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 PLS1Q14651 629 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 CNNM4Q6P4Q7 775 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 LARGE2Q8N3Y3 721 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 OR8K1Q8NGG5 319 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 THAP9Q9H5L6 903 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 PLIN4Q96Q06 1357 aa9.85□□□□□ -0.83
SNCA-201ENST00000336904 OPLAHO14841 1288 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 ATP1A1P05023 1023 aaKnown RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 PLA2G4BP0C869 781 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
SNCA-201ENST00000336904 AMPD3Q01432 767 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 CTTNQ14247 550 aaKnown RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 RRAGAQ7L523 313 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 FBXO11Q86XK2 927 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 NOA1Q8NC60 698 aaKnown RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 NOC3LQ8WTT2 800 aaKnown RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 PARD6BQ9BYG5 372 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 NHEJ1Q9H9Q4 299 aaPredicted RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 MLXIPQ9HAP2 919 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■■■■ 149.1
SNCA-201ENST00000336904 EHD2Q9NZN4 543 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 SIPA1L1O43166 1804 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 FOCADQ5VW36 1801 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 SASH3O75995 380 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 EEF1GP26641 437 aaKnown RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 CXCR5P32302 372 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 CCDC40Q4G0X9 1142 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 PRAMEF18Q5VWM3 479 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 UNC13DQ70J99 1090 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 TMTC1Q8IUR5 882 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 DNAJC19Q96DA6 116 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
SNCA-201ENST00000336904 PNKPQ96T60 521 aa9.84□□□□□ -0.83
SNCA-201ENST00000336904 CTAGE9A4FU28 777 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 EML1O00423 815 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 ZNF263O14978 683 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 PLSCR1O15162 318 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 SORBS3O60504 671 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 PNMA6AP0CW24 399 aaPredicted RBP9.83□□□□□ -0.84
SNCA-201ENST00000336904 BMP3P12645 472 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 H2AFXP16104 143 aaPredicted RBP9.83□□□□□ -0.84
SNCA-201ENST00000336904 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 NBPF9Q3BBW0 867 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 SYDE2Q5VT97 1194 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 CATSPER3Q86XQ3 398 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 GSPT2Q8IYD1 628 aaKnown RBP9.83□□□□□ -0.84
SNCA-201ENST00000336904 NDST4Q9H3R1 872 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 ASTN2O75129 1339 aaPredicted RBP9.83□□□□□ -0.84
SNCA-201ENST00000336904 ITIH6Q6UXX5 1313 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 CLIC2O15247 247 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 PRPF6O94906 941 aaKnown RBP9.83□□□□□ -0.84
SNCA-201ENST00000336904 ACTN1P12814 892 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 RXRBP28702 533 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 DNM2P50570 870 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 SLC15A2Q16348 729 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 FAM26FQ5R3K3 315 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 CPXCR1Q8N123 301 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 RAB34Q9BZG1 259 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 ZBTB21Q9ULJ3 1066 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
SNCA-201ENST00000336904 ARFGEF1Q9Y6D6 1849 aa9.83□□□□□ -0.84
SNCA-201ENST00000336904 BICDL2A1A5D9 508 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 RBAK-RBAKDNI3L0D1 243 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 BUB1O43683 1085 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNCA-201ENST00000336904 ARSHQ5FYA8 562 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 TMEM179Q6ZVK1 233 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 PURBQ96QR8 312 aaKnown RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 AMNQ9BXJ7 453 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 BHMT2Q9H2M3 363 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 CAPN11Q9UMQ6 739 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 FHOD1Q9Y613 1164 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 ERICH4A6NGS2 130 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 NCK2O43639 380 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 ZBTB7AO95365 584 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 MYBP10242 640 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 DPEP1P16444 411 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 GFPT1Q06210 699 aaPredicted RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 TMEM119Q4V9L6 283 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 VWA3BQ502W6 1294 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 TDRD12Q587J7 1177 aaKnown RBP9.82□□□□□ -0.84
SNCA-201ENST00000336904 CENPPQ6IPU0 288 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 TMCO3Q6UWJ1 677 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 SFR1Q86XK3 245 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 JAKMIP2Q96AA8 810 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 CCDC17Q96LX7 622 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 OGFRQ9NZT2 677 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 SUGT1Q9Y2Z0 365 aa9.82□□□□□ -0.84
SNCA-201ENST00000336904 COL4A5P29400 1685 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms