RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 LARP4BQ92615 738 aaKnown RBP22.03■■□□□ 1.12
CDCA4-201ENST00000336219 NDST4Q9H3R1 872 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 FOCADQ5VW36 1801 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 ESYT3A0FGR9 886 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 PDHBP11177 359 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 ATP1A2P50993 1020 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 RASSF7Q02833 373 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 MTMR8Q96EF0 704 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 STIM2Q9P246 746 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 HYOU1Q9Y4L1 999 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 EBAG9O00559 213 aa22.02■■□□□ 1.12
CDCA4-201ENST00000336219 SLC37A4O43826 429 aa22.02■■□□□ 1.12
CDCA4-201ENST00000336219 KRT14P02533 472 aa22.02■■□□□ 1.12
CDCA4-201ENST00000336219 IL1R1P14778 569 aa22.02■■□□□ 1.12
CDCA4-201ENST00000336219 RFC4P35249 363 aa22.02■■□□□ 1.12
CDCA4-201ENST00000336219 PDE4CQ08493 712 aa22.02■■□□□ 1.12
CDCA4-201ENST00000336219 FRMPD2Q68DX3 1309 aaPredicted RBP22.02■■□□□ 1.11
CDCA4-201ENST00000336219 GOLGA8KD6RF30 607 aa22.02■■□□□ 1.11
CDCA4-201ENST00000336219 EDIL3O43854 480 aa22.02■■□□□ 1.11
CDCA4-201ENST00000336219 UFL1O94874 794 aa22.02■■□□□ 1.11
CDCA4-201ENST00000336219 CPP00450 1065 aa22.02■■□□□ 1.11
CDCA4-201ENST00000336219 ZNF572Q7Z3I7 529 aaPredicted RBP22.02■■□□□ 1.11
CDCA4-201ENST00000336219 GUF1Q8N442 669 aaKnown RBP22.02■■□□□ 1.11
CDCA4-201ENST00000336219 ZIM3Q96PE6 472 aa22.02■■□□□ 1.11
CDCA4-201ENST00000336219 ABCB11O95342 1321 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 TDP2O95551 362 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 FAM153BP0C7A2 387 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 MAGEA1P43355 309 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 MAN2A1Q16706 1144 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 TMEM266Q2M3C6 531 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 FAM153CQ494X1 144 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 DYMQ7RTS9 669 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 FAM163AQ96GL9 167 aaPredicted RBP22.01■■□□□ 1.11
CDCA4-201ENST00000336219 CDK5RAP3Q96JB5 506 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 TLR10Q9BXR5 811 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 FAM153AQ9UHL3 310 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 EPHB4P54760 987 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 GLIS3Q8NEA6 775 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 COA7Q96BR5 231 aa22.01■■□□□ 1.11
CDCA4-201ENST00000336219 POTEMA6NI47 508 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 ERLIN2O94905 339 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 GLI1P08151 1106 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 SLC1A4P43007 532 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 ADCY7P51828 1080 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 NAP1L1P55209 391 aaKnown RBP22■■□□□ 1.11
CDCA4-201ENST00000336219 FBXW10Q5XX13 1052 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 C8orf74Q6P047 294 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 GAKO14976 1311 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 FGFR1OPO95684 399 aaKnown RBP22■■□□□ 1.11
CDCA4-201ENST00000336219 CARSP49589 748 aaKnown RBP22■■□□□ 1.11
CDCA4-201ENST00000336219 PPARDQ03181 441 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 LRRC63Q05C16 580 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 PDIA5Q14554 519 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 KCTD19Q17RG1 926 aaPredicted RBP22■■□□□ 1.11
CDCA4-201ENST00000336219 MFSD14BQ5SR56 506 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 KLHDC7AQ5VTJ3 777 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 RAD54LQ92698 747 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 ALS2CR12Q96Q35 445 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 RUFY1Q96T51 708 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 RAB34Q9BZG1 259 aa22■■□□□ 1.11
CDCA4-201ENST00000336219 PLIN4Q96Q06 1357 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 HSF2BPO75031 334 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 LCA5LO95447 670 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 TCP1P17987 556 aaKnown RBP21.99■■□□□ 1.11
CDCA4-201ENST00000336219 ATP2B4P23634 1241 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 VPS72Q15906 364 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 TRAPPC3LQ5T215 181 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 CCDC84Q86UT8 332 aaPredicted RBP21.99■■□□□ 1.11
CDCA4-201ENST00000336219 RPGRQ92834 1020 aaKnown RBP21.99■■□□□ 1.11
CDCA4-201ENST00000336219 NUDT12Q9BQG2 462 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 NFU1Q9UMS0 254 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 LY75O60449 1722 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 RNASE9P60153 205 aaKnown RBP21.99■■□□□ 1.11
CDCA4-201ENST00000336219 LRRC41Q15345 812 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 TRADDQ15628 312 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 ASPRV1Q53RT3 343 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 SNX29Q8TEQ0 813 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 IFT81Q8WYA0 676 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 BAP1Q92560 729 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 MTMR4Q9NYA4 1195 aa21.99■■□□□ 1.11
CDCA4-201ENST00000336219 SHTN1A0MZ66 631 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 OPA1O60313 960 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 PRLRP16471 622 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 APBA1Q02410 837 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 EHHADHQ08426 723 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 LRRC55Q6ZSA7 311 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 SLF2Q8IX21 1173 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 CCDC43Q96MW1 224 aaKnown RBP21.98■■□□□ 1.11
CDCA4-201ENST00000336219 NLRC4Q9NPP4 1024 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 GGA1Q9UJY5 639 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 PAFAH1B1P43034 410 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 ITIH3Q06033 890 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 PRR5LQ6MZQ0 368 aa21.98■■□□□ 1.11
CDCA4-201ENST00000336219 LRRC47Q8N1G4 583 aaKnown RBP21.98■■□□□ 1.11
CDCA4-201ENST00000336219 PACSIN2Q9UNF0 486 aaPredicted RBP21.98■■□□□ 1.11
CDCA4-201ENST00000336219 ZEB2O60315 1214 aa21.97■■□□□ 1.11
CDCA4-201ENST00000336219 GUCY2FP51841 1108 aa21.97■■□□□ 1.11
CDCA4-201ENST00000336219 TMEM119Q4V9L6 283 aa21.97■■□□□ 1.11
CDCA4-201ENST00000336219 KRT79Q5XKE5 535 aa21.97■■□□□ 1.11
CDCA4-201ENST00000336219 EMBQ6PCB8 327 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms