RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NOP14P78316 857 aaKnown RBP10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TTC17Q96AE7 1141 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF277Q9NRM2 450 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SAMSN1Q9NSI8 373 aaKnown RBP10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TRAF3IP3Q9Y228 551 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 IQANK1A0A1B0GTG1 560 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 BTBD18B2RXH4 712 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 GAS7O60861 476 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TRPC1P48995 793 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 MFAP3P55082 362 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TOGARAM2Q6ZUX3 1019 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 GRAMD1CQ8IYS0 662 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF280CQ8ND82 737 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 FAM161BQ96MY7 647 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 MMS19Q96T76 1030 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 ANO3Q9BYT9 981 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 GINM1Q9NU53 330 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 NDE1Q9NXR1 346 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 A0A0D9SFI3 127 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 ADD1P35611 737 aaKnown RBP10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 RETREG2Q8NC44 543 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TEKT2Q9UIF3 430 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 DNMBPQ6XZF7 1577 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SORBS3O60504 671 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SRGAP2O75044 1071 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SLC1A4P43007 532 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 MAGOHP61326 146 aaKnown RBP10.59□□□□□ -0.71
COL4A6-201ENST00000334504 PPARAQ07869 468 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TRIM60Q495X7 471 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 FAM26FQ5R3K3 315 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 OLFML2BQ68BL8 750 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SLC30A9Q6PML9 568 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 RFX8Q6ZV50 586 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 CCDC127Q96BQ5 260 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TTC1Q99614 292 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 PPP6R2O75170 966 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 TNNC2P02585 160 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 KITP10721 976 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 TMOD1P28289 359 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 HDAC4P56524 1084 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 PTGDRQ13258 359 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 FBXW10Q5XX13 1052 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 ARMCX5Q6P1M9 558 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 SRLQ86TD4 932 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 LRRC59Q96AG4 307 aaKnown RBP10.58□□□□□ -0.71
COL4A6-201ENST00000334504 DACH2Q96NX9 599 aa10.58□□□□□ -0.71
COL4A6-201ENST00000334504 HAUS5O94927 633 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 DARS2Q6PI48 645 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 ANO5Q75V66 913 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PCGF5Q86SE9 256 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 FAM89AQ96GI7 184 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 NUDCD1Q96RS6 583 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 KIAA0586Q9BVV6 1533 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 ADCY9O60503 1353 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 CFAP73A6NFT4 308 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 HSPA4LO95757 839 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 TFAP4Q01664 338 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 P2RX5Q93086 422 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PAWRQ96IZ0 340 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 METTL22Q9BUU2 404 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 MIS12Q9H081 205 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 GOLGA8CPA6NN73 597 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 KRT75O95678 551 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 HIBADHP31937 336 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PPP2R2AP63151 447 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 KIF19Q2TAC6 998 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 GLE1Q53GS7 698 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PCDHB4Q9Y5E5 795 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 AFPP02771 609 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 ELF1P32519 619 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 OCRLQ01968 901 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PTK2Q05397 1052 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 C10orf76Q5T2E6 689 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 TRIM67Q6ZTA4 783 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 FAM178BQ8IXR5 827 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 SPATA5Q8NB90 893 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 GJA10Q969M2 543 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 PCDHA12Q9UN75 941 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 STXBP3O00186 592 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 IDI1Q13907 227 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 BBS9Q3SYG4 887 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 CCDC24Q8N4L8 307 aa10.58□□□□□ -0.72
COL4A6-201ENST00000334504 STX18Q9P2W9 335 aaKnown RBP10.58□□□□□ -0.72
COL4A6-201ENST00000334504 GFPT2O94808 682 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 SRGAP2BP0DMP2 458 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 KRT4P19013 534 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 CARSP49589 748 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 EPHB1P54762 984 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 NAA30Q147X3 362 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms