RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 LIMA1Q9UHB6 759 aaKnown RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 PLAAQ9Y263 795 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SLIT3O75094 1523 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 HEXIM1O94992 359 aaKnown RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 FAM153BP0C7A2 387 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 ATP2C1P98194 919 aaPredicted RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SEC23AQ15436 765 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 KRT71Q3SY84 523 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 FAM153CQ494X1 144 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 ELAC2Q9BQ52 826 aaKnown RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 NHEJ1Q9H9Q4 299 aaPredicted RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 FAM153AQ9UHL3 310 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 CTNND1O60716 968 aaKnown RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 PFDN1O60925 122 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 ELF3P78545 371 aaPredicted RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 ARFGAP2Q8N6H7 521 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 ABTB1Q969K4 478 aaPredicted RBP13.01□□□□□ -0.33
LIMK2-202ENST00000333611 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 EPAS1Q99814 870 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 PANK4Q9NVE7 773 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■■□□□ 12.9
LIMK2-202ENST00000333611 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SPATA31A3Q5VYP0 1347 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 SCN11AQ9UI33 1791 aa13.01□□□□□ -0.33
LIMK2-202ENST00000333611 RAD21O60216 631 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
LIMK2-202ENST00000333611 TRIM14Q14142 442 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 TCERG1LQ5VWI1 586 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 MIS18BP1Q6P0N0 1132 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 MS4A14Q96JA4 679 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 OSBPL9Q96SU4 736 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 TMEM60Q9H2L4 133 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 MYO5AQ9Y4I1 1855 aaKnown RBP13□□□□□ -0.33
LIMK2-202ENST00000333611 FCER1AP12319 257 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 PRPHP41219 470 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 STAG2Q8N3U4 1231 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 CNOT6LQ96LI5 555 aaKnown RBP13□□□□□ -0.33
LIMK2-202ENST00000333611 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 FAM205AQ6ZU69 1335 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 A8MUI8 341 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 H7C1D1 291 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 TROAPQ12815 778 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 PDXDC2PQ6P474 469 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 BLIDQ8IZY5 108 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 DYNLL2Q96FJ2 89 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
LIMK2-202ENST00000333611 LGALS16A8MUM7 142 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 MARCH6O60337 910 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 CYP19A1P11511 503 aaPredicted RBP12.99□□□□□ -0.33
LIMK2-202ENST00000333611 FGFR2P21802 821 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 ERFP50548 548 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 CACNA2D4Q7Z3S7 1137 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 LMNTD2Q8IXW0 634 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 KRT12Q99456 494 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 SH3GL2Q99962 352 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 IFIH1Q9BYX4 1025 aaKnown RBP12.99□□□□□ -0.33
LIMK2-202ENST00000333611 ZHX3Q9H4I2 956 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 ZFATQ9P243 1243 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
LIMK2-202ENST00000333611 TFAP4Q01664 338 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 PAK2Q13177 524 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 CUL3Q13618 768 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 KLHL29Q96CT2 875 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 SAMD15Q9P1V8 674 aa12.99□□□□□ -0.33
LIMK2-202ENST00000333611 NKRFO15226 690 aaKnown RBP eCLIP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 TACC1O75410 805 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ATP4AP20648 1035 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 TECP42680 631 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 AMPD2Q01433 879 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 TBC1D25Q3MII6 688 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 SPATA21Q7Z572 469 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ERICH1Q86X53 443 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 DISC1Q9NRI5 854 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 TCP11L1Q9NUJ3 509 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 RGL1Q9NZL6 768 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 DLGAP2Q9P1A6 1054 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 USO1O60763 962 aaKnown RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 IRF2BP1Q8IU81 584 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 CCDC197Q8NCU1 140 aa12.98□□□□□ -0.33
LIMK2-202ENST00000333611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
LIMK2-202ENST00000333611 C2CD2Q9Y426 696 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms