RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 GNASQ5JWF2 1037 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 CCDC62Q6P9F0 684 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 GIMAP8Q8ND71 665 aaPredicted RBP23.37■■□□□ 1.33
MRPL40-201ENST00000333130 HTATIP2Q9BUP3 242 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 MOXD2PA6NHM9 499 aa23.36■■□□□ 1.33
MRPL40-201ENST00000333130 LY6KQ17RY6 165 aa23.36■■□□□ 1.33
MRPL40-201ENST00000333130 DDX41Q9UJV9 622 aaKnown RBP23.36■■□□□ 1.33
MRPL40-201ENST00000333130 RGS20O76081 388 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 ARIH2O95376 493 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 FOSBP53539 338 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 NKX3-2P78367 333 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 LAMC2Q13753 1193 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 NEDD9Q14511 834 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 NONOQ15233 471 aaKnown RBP eCLIP23.35■■□□□ 1.33
MRPL40-201ENST00000333130 CEP55Q53EZ4 464 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 DHX37Q8IY37 1157 aaKnown RBP23.35■■□□□ 1.33
MRPL40-201ENST00000333130 KLHDC9Q8NEP7 349 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 DIS3LQ8TF46 1054 aaKnown RBP23.35■■□□□ 1.33
MRPL40-201ENST00000333130 TNFRSF25Q93038 417 aa23.35■■□□□ 1.33
MRPL40-201ENST00000333130 ZFP91Q96JP5 570 aaPredicted RBP23.35■■□□□ 1.33
MRPL40-201ENST00000333130 SPATA31C2B4DYI2 1134 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 CYP3A4P08684 503 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 SETQ01105 290 aaPredicted RBP23.34■■□□□ 1.33
MRPL40-201ENST00000333130 NIPA1Q7RTP0 329 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 OXER1Q8TDS5 423 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 MXRA8Q9BRK3 442 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 SENP6Q9GZR1 1112 aaPredicted RBP23.34■■□□□ 1.33
MRPL40-201ENST00000333130 MLXIPQ9HAP2 919 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 JADE2Q9NQC1 790 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 TSHZ2Q9NRE2 1034 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 POLR3EQ9NVU0 708 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 UBIAD1Q9Y5Z9 338 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 DOCK5Q9H7D0 1870 aa23.34■■□□□ 1.33
MRPL40-201ENST00000333130 UBA1P22314 1058 aaKnown RBP23.33■■□□□ 1.33
MRPL40-201ENST00000333130 GUCY1B3Q02153 619 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 MLLT1Q03111 559 aaPredicted RBP23.33■■□□□ 1.33
MRPL40-201ENST00000333130 GNL2Q13823 731 aaKnown RBP23.33■■□□□ 1.33
MRPL40-201ENST00000333130 KCNA10Q16322 511 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 UBE2Q1Q7Z7E8 422 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 DIS3L2Q8IYB7 885 aaKnown RBP23.33■■□□□ 1.33
MRPL40-201ENST00000333130 CRYGNQ8WXF5 182 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 EMID1Q96A84 441 aaPredicted RBP23.33■■□□□ 1.33
MRPL40-201ENST00000333130 SENP7Q9BQF6 1050 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 FOXD4L1Q9NU39 408 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 PHF24Q9UPV7 400 aa23.33■■□□□ 1.33
MRPL40-201ENST00000333130 KPNA6O60684 536 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 CABYRO75952 493 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 GGPS1O95749 300 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 HSP90AA1P07900 732 aaKnown RBP23.32■■□□□ 1.32
MRPL40-201ENST00000333130 PDCP20941 246 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 USP11P51784 963 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 ACLYP53396 1101 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 BEX3Q00994 111 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 TBCKQ8TEA7 893 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 COPS5Q92905 334 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 GLT1D1Q96MS3 346 aa23.32■■□□□ 1.32
MRPL40-201ENST00000333130 MYADML2A6NDP7 307 aa23.31■■□□□ 1.32
MRPL40-201ENST00000333130 NOP56O00567 594 aaKnown RBP23.31■■□□□ 1.32
MRPL40-201ENST00000333130 ASGR1P07306 291 aa23.31■■□□□ 1.32
MRPL40-201ENST00000333130 COL6A1P12109 1028 aa23.31■■□□□ 1.32
MRPL40-201ENST00000333130 ITGB5P18084 799 aa23.31■■□□□ 1.32
MRPL40-201ENST00000333130 MNX1P50219 401 aaPredicted RBP23.31■■□□□ 1.32
MRPL40-201ENST00000333130 ARHGAP1Q07960 439 aa23.31■■□□□ 1.32
MRPL40-201ENST00000333130 CELF3Q5SZQ8 465 aaKnown RBP23.31■■□□□ 1.32
MRPL40-201ENST00000333130 TMEM63BQ5T3F8 832 aa23.31■■□□□ 1.32
MRPL40-201ENST00000333130 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
MRPL40-201ENST00000333130 NAP1L4Q99733 375 aaKnown RBP23.31■■□□□ 1.32
MRPL40-201ENST00000333130 BTBD18B2RXH4 712 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 ANP32AP39687 249 aaKnown RBP23.3■■□□□ 1.32
MRPL40-201ENST00000333130 NR5A1Q13285 461 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 METTL7BQ6UX53 244 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 PLA2G4DQ86XP0 818 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 PPTC7Q8NI37 304 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 SPATA33Q96N06 139 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 SDF4Q9BRK5 362 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 FOXP1Q9H334 677 aaPredicted RBP23.3■■□□□ 1.32
MRPL40-201ENST00000333130 STARD7Q9NQZ5 370 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 KCNH7Q9NS40 1196 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 TCEAL9Q9UHQ7 104 aa23.3■■□□□ 1.32
MRPL40-201ENST00000333130 MKI67P46013 3256 aaKnown RBP23.3■■□□□ 1.32
MRPL40-201ENST00000333130 A0A1W2PQ45 241 aaPredicted RBP23.29■■□□□ 1.32
MRPL40-201ENST00000333130 A0A1W2PQY0 241 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 A6NJR5 290 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 MEIS1O00470 390 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 DGKDQ16760 1214 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 MYSM1Q5VVJ2 828 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 CCSAPQ6IQ19 270 aaPredicted RBP23.29■■□□□ 1.32
MRPL40-201ENST00000333130 PIK3AP1Q6ZUJ8 805 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 AFG1LQ8WV93 481 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 FERMT2Q96AC1 680 aa23.29■■□□□ 1.32
MRPL40-201ENST00000333130 PDE4DIPQ5VU43 2346 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 H3BQV1 296 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 CTAGE5O15320 804 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 MYL3P08590 195 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 SYT1P21579 422 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 PTGS1P23219 599 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 U2AF2P26368 475 aaKnown RBP eCLIP23.28■■□□□ 1.32
MRPL40-201ENST00000333130 CIITAP33076 1130 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 SEMA3FQ13275 785 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms