RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 NAPGQ99747 312 aaPredicted RBP16.52■□□□□ 0.24
CLCNKA-201ENST00000331433 ARGLU1Q9NWB6 273 aaPredicted RBP16.52■□□□□ 0.24
CLCNKA-201ENST00000331433 CLRN2A0PK11 232 aa16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 HOXA13P31271 388 aaPredicted RBP16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 CHMP4BP1P59074 171 aa16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 PSMD2Q13200 908 aa16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 FAM26FQ5R3K3 315 aa16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 MYOCDQ8IZQ8 938 aa16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 MBOAT7Q96N66 472 aa16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 NHEJ1Q9H9Q4 299 aaPredicted RBP16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 FAM207AQ9NSI2 230 aaPredicted RBP16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 ZNHIT6Q9NWK9 470 aaKnown RBP16.52■□□□□ 0.23
CLCNKA-201ENST00000331433 POTEFA5A3E0 1075 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 SEC31AO94979 1220 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 ECE1P42892 770 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 POTEGQ6S5H5 508 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 POTEEQ6S8J3 1075 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 SRGAP1Q7Z6B7 1085 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 GPBP1Q86WP2 473 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 FAM86B1E9PN63 330 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 OPLAHO14841 1288 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 FAM86B2P0C5J1 330 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 GPIHBP1Q8IV16 184 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 KRT222Q8N1A0 295 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 RABGGTAQ92696 567 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 MYO1AQ9UBC5 1043 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 SIK3Q9Y2K2 1263 aa16.51■□□□□ 0.23
CLCNKA-201ENST00000331433 SPDYE3A6NKU9 549 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 SPIRE1Q08AE8 756 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 CCDC122Q5T0U0 273 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 LENG9Q96B70 501 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 TSG101Q99816 390 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 FAM53CQ9NYF3 392 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 RCCD1A6NED2 376 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 RAD17O75943 681 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 FGFR1OPO95684 399 aaKnown RBP16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 PLEKP08567 350 aaPredicted RBP16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 CYP11B2P19099 503 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 ZCWPW2Q504Y3 356 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 FIGNQ5HY92 759 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 KIAA1755Q5JYT7 1200 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 NCAPH2Q6IBW4 605 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 KIAA1328Q86T90 577 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 MMRN2Q9H8L6 949 aa16.5■□□□□ 0.23
CLCNKA-201ENST00000331433 A0A1W2PQJ5 194 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 MEIS1O00470 390 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 ZRANB2O95218 330 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 CYLC1P35663 651 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 MOXD1Q6UVY6 613 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 CYP2W1Q8TAV3 490 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 LACRTQ9GZZ8 138 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 PCDHA2Q9Y5H9 948 aa16.49■□□□□ 0.23
CLCNKA-201ENST00000331433 TRAF5O00463 557 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 ENC1O14682 589 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 PNMA6AP0CW24 399 aaPredicted RBP16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 SREBF1P36956 1147 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 PSMC6P62333 389 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 KRT83P78385 493 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 BMS1Q14692 1282 aaKnown RBP16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 ARSHQ5FYA8 562 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 CCDC65Q8IXS2 484 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 CEP112Q8N8E3 955 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 ZHX3Q9H4I2 956 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 ABCB11O95342 1321 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 Q4G0T1 1027 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 BTNL9Q6UXG8 535 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 ST7Q9NRC1 585 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
CLCNKA-201ENST00000331433 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms