RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 EIF3DO15371 548 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 USO1O60763 962 aaKnown RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 TACC1O75410 805 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 BTNL9Q6UXG8 535 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 NUP88Q99567 741 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 NIP7Q9Y221 180 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 FAN1Q9Y2M0 1017 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 KIF11P52732 1056 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 EVA1CP58658 441 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 AP3B2Q13367 1082 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 CDC37Q16543 378 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 SLC18A3Q16572 532 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 SLCO2A1Q92959 643 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 MKNK1Q9BUB5 465 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 ISCUQ9H1K1 167 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 LZTFL1Q9NQ48 299 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 ATP6V0A2Q9Y487 856 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 MAPTP10636 758 aaKnown RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 GSCP56915 257 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 SNRPFP62306 86 aaKnown RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 STK4Q13043 487 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 TXNRD1Q16881 649 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 RAB11FIP4Q86YS3 637 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 C12orf56Q8IXR9 622 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 CRAMP1Q96RY5 1269 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 KCND2Q9NZV8 630 aa9.73□□□□□ -0.85
CPNE8-201ENST00000331366 MAGEC2Q9UBF1 373 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-201ENST00000331366 HMGB1P1B2RPK0 211 aaPredicted RBP9.72□□□□□ -0.85
CPNE8-201ENST00000331366 CCDC188H7C350 402 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 TLR2O60603 784 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 PRDM1O75626 825 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 ATP2B4P23634 1241 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 SLC9A9Q8IVB4 645 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 CSGALNACT2Q8N6G5 542 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 PDILTQ8N807 584 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 SLF1Q9BQI6 1058 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 SLITRK6Q9H5Y7 841 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 AGPAT5Q9NUQ2 364 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 PHIPQ8WWQ0 1821 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 BAG3O95817 575 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 AFMP43652 599 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 GYG1P46976 350 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 HDLBPQ00341 1268 aaKnown RBP9.72□□□□□ -0.85
CPNE8-201ENST00000331366 KIF5AQ12840 1032 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 CCDC122Q5T0U0 273 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 FKBP15Q5T1M5 1219 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 ISM2Q6H9L7 571 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 B3GNT9Q6UX72 402 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 LEKR1Q6ZMV7 388 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 POTEDQ86YR6 584 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 ZKSCAN3Q9BRR0 538 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 OLFML3Q9NRN5 406 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 SUCLA2Q9P2R7 463 aaPredicted RBP9.72□□□□□ -0.85
CPNE8-201ENST00000331366 MYH11P35749 1972 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 MYMKA6NI61 221 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 PPP1R37O75864 691 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 SLC12A3P55017 1021 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 LARP4BQ92615 738 aaKnown RBP9.72□□□□□ -0.85
CPNE8-201ENST00000331366 HAS1Q92839 578 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 CELF1Q92879 486 aaKnown RBP9.72□□□□□ -0.85
CPNE8-201ENST00000331366 ALS2CR12Q96Q35 445 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 RAB34Q9BZG1 259 aa9.72□□□□□ -0.85
CPNE8-201ENST00000331366 RLFQ13129 1914 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 CCDC194A0A1B0GVG4 234 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 GHRP10912 638 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 PDHBP11177 359 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 ALAS1P13196 640 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 IRAK1P51617 712 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 BIRC3Q13489 604 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 SMYD4Q8IYR2 804 aaPredicted RBP9.71□□□□□ -0.85
CPNE8-201ENST00000331366 GOLGA6L1Q8N7Z2 621 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 GMCL1P1Q8NEA9 526 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 POLR3CQ9BUI4 534 aaPredicted RBP9.71□□□□□ -0.85
CPNE8-201ENST00000331366 FAM204AQ9H8W3 233 aa9.71□□□□□ -0.85
CPNE8-201ENST00000331366 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.85
CPNE8-201ENST00000331366 BRCA1P38398 1863 aaKnown RBP9.71□□□□□ -0.85
CPNE8-201ENST00000331366 PNMA6FA0A0J9YX94 578 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 TRIM49BA6NDI0 452 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 B4DLN1 442 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 MYBL2P10244 700 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 VEGFAP15692 232 aaPredicted RBP9.71□□□□□ -0.86
CPNE8-201ENST00000331366 ATP6V1AP38606 617 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 ZNF131P52739 623 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 FKBP3Q00688 224 aaKnown RBP9.71□□□□□ -0.86
CPNE8-201ENST00000331366 NCAPH2Q6IBW4 605 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 SV2BQ7L1I2 683 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 IRF2BP2Q7Z5L9 587 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 SAMD3Q8N6K7 520 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 MIGA1Q8NAN2 632 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 NEK11Q8NG66 645 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 TLCD1Q96CP7 247 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 EPC1Q9H2F5 836 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 SIX2Q9NPC8 291 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 COL4A3BPQ9Y5P4 624 aa9.71□□□□□ -0.86
CPNE8-201ENST00000331366 CAPN6Q9Y6Q1 641 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms